fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006766 not found in 448aa AT2G24260.1 not_1st 0.404293381 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G24260.1     ---------MMNSSLLTPSSS-----------SSSHIQTPSTTFDHEDFLDQIFSS----
pt006766_POPTR_ MRPCSREMQGMN-SLLNPSSQIPLQDLQNQQIQNSHFDPNSSSND--DFLEQMLSAIPSC
                          ** ***.***.           ..**::. *:: *  ***:*::*:    

AT2G24260.1     ------APW----------PSVVDDAHPLPSD---------------GFHG---------
pt006766_POPTR_ SWADPKSPWDLNPPTNLPFPTNNNSSSAKPRDLFNETPPSNTDNNNVGFHDNFDESVILA
                      :**          *:  :.: . * *               ***.         

AT2G24260.1     -----HDVD--------------------------SRNQPIMMMPLNDGS-SVHALYNGF
pt006766_POPTR_ SKLRQHQISGGSGAAAAAKMMLQQQLLMAAARGGLSQNDDIDVSPTQGGDGSMQGLFNGF
                     *::.                          *:*: * : * :.*. *::.*:***

AT2G24260.1     ---SVAG-------SLPNFQIPQGSGGGL----MNQQGQTQT--QTQPQASASTATGGTV
pt006766_POPTR_ RAGSMNGTVRASNQSMQHFNHPQ--GGAMQSPNLGAQGAATTAVMNQPQASGS--NGG--
                   *: *       *: :*: **  **.:    :. ** : *   .*****.*  .**  

AT2G24260.1     AAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDEIID
pt006766_POPTR_ -APAQPRQRVRARRGQATDPHSIAERV-LERIAERMKALQELVPNANKTDKASMLDEIID
                 **.*.* ::****************:  ****************.**************

AT2G24260.1     YVKFLQLQVKVLSMSRLGGAASVSSQI----SEAGG------SHGNASSAMVGGSQTAGN
pt006766_POPTR_ YVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEAGGDCIQANANGGSIARTTNGNQTAST
                *********************:*:. :    *****      ::*.: :  ..*.***..

AT2G24260.1     SNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHSR--------N
pt006766_POPTR_ NDSSLTVTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATCHNRTSGIINSHN
                .:.*:*:******************************************.*        *

AT2G24260.1     PLIPGAVADVGGPSPPNLSGMTIQSTSTKMGSGNGKLNGNGVTERSSSIAVKEAVSVSKA
pt006766_POPTR_ PLLQ---SNGEGPTSPSMSVLTVQSATM----------GNGVA--------KDAASVSKP
                **:    ::  **:.*.:* :*:**::           ****:        *:*.****.
BoxShade v3.31 C (beta, 970507) Output
AT2G24260.1     - - - - - - - - - M M N S S L L T P S S S - - - - - - - - - - - S S S H I Q T P S T T F D H E D F L D Q I F S S - - - -
pt006766_POPTR_    M R P C S R E M Q G M N - S L L N P S S Q I P L Q D L Q N Q Q I Q N S H F D P N S S S N D - - D F L E Q M L S A I P S C
 
AT2G24260.1     - - - - - - A P W - - - - - - - - - - P S V V D D A H P L P S D - - - - - - - - - - - - - - - G F H G - - - - - - - - -
pt006766_POPTR_    S W A D P K S P W D L N P P T N L P F P T N N N S S S A K P R D L F N E T P P S N T D N N N V G F H D N F D E S V I L A
 
AT2G24260.1     - - - - - H D V D - - - - - - - - - - - - - - - - - - - - - - - - - - S R N Q P I M M M P L N D G S - S V H A L Y N G F
pt006766_POPTR_    S K L R Q H Q I S G G S G A A A A A K M M L Q Q Q L L M A A A R G G L S Q N D D I D V S P T Q G G D G S M Q G L F N G F
 
AT2G24260.1     - - - S V A G - - - - - - - S L P N F Q I P Q G S G G G L - - - - M N Q Q G Q T Q T - - Q T Q P Q A S A S T A T G G T V
pt006766_POPTR_    R A G S M N G T V R A S N Q S M Q H F N H P Q - - G G A M Q S P N L G A Q G A A T T A V M N Q P Q A S G S - - N G G - -
 
AT2G24260.1     A A P P Q S R T K I R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L V P N G N K T D K A S M L D E I I D
pt006766_POPTR_    - A P A Q P R Q R V R A R R G Q A T D P H S I A E R V - L E R I A E R M K A L Q E L V P N A N K T D K A S M L D E I I D
 
AT2G24260.1     Y V K F L Q L Q V K V L S M S R L G G A A S V S S Q I - - - - S E A G G - - - - - - S H G N A S S A M V G G S Q T A G N
pt006766_POPTR_    Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M S S E A G G D C I Q A N A N G G S I A R T T N G N Q T A S T
 
AT2G24260.1     S N D S V T M T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S T A T C H S R - - - - - - - - N
pt006766_POPTR_    N D S S L T V T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S T A T C H N R T S G I I N S H N
 
AT2G24260.1     P L I P G A V A D V G G P S P P N L S G M T I Q S T S T K M G S G N G K L N G N G V T E R S S S I A V K E A V S V S K A
pt006766_POPTR_    P L L Q - - - S N G E G P T S P S M S V L T V Q S A T M - - - - - - - - - - G N G V A - - - - - - - - K D A A S V S K P
 
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