fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb028138 not found in 442aa AT2G24260.1 1st_1st 0.341681574 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G24260.1     MMNSSLLTPSSSSSSHIQTPSTTFDHEDFLDQIFSS------------APW---------
Sb028138_Sorbi1 ------MQP---SGREMQGGG---GQDDFFDQMLSTLPAAWSDLGSGKSPWELPAGAGAV
                      : *   *. .:*  .   .::**:**::*:            :**         

AT2G24260.1     ---PSVVDDAHPLPSDGFH----GHDVDSRNQPIMM-------------------MPL--
Sb028138_Sorbi1 PEDAAAYDEAALLASRLRHHQIGGGGAGAGEKPLMLHLSDLHGLGGGGAGDDAGFMPLPL
                   .:. *:*  *.*   *    * ...: ::*:*:                   ***  

AT2G24260.1     ----------------NDGSSVHALYNGFSVAG-SLPNFQIPQGSGGGLMNQQ----GQT
Sb028138_Sorbi1 FTDRARDDMDAAFKSPNATGADQALYNGFGAAGMHAAVHQPPFGQGGSMPAAQSFGGGAA
                                *  .: :******..**   . .* * *.**.:   *    * :

AT2G24260.1     QTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQEL
Sb028138_Sorbi1 AAGGAPAPAAGAASAGGGAAPPRQQRQ-RAKRGQATDPHSIAERLRRERIAERMKALQEL
                 :   * .:*.:*:.*  ****:.: : **:*****************************

AT2G24260.1     VPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAS----VSSQISEAGGSHGNAS
Sb028138_Sorbi1 VPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGATAVGPLVASMASEGNGNGNGTS
                ***.**********************************::    *:*  **..*. ..:*

AT2G24260.1     SAMVGGSQTAGNSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAISTATC
Sb028138_Sorbi1 DSGNGNAANGENGGGSLQVTEQQVARLMEEDMGTAMQYLQGKGLCLMPISLASAISSATS
                .:  *.: .. *...*: :**:***:*******:******************:***:**.

AT2G24260.1     HS-------------RNPLIPGAVADVGGPSPPNLSGMTIQSTSTKMGSGNGKLNGNGVT
Sb028138_Sorbi1 SSLLSRPSMGAMGGARGPL-----HDGGSPASPPLVNGGDDSRTIKDG---GKQ------
                 *             *.**      * *.*:.* * .   :* : * *   **       

AT2G24260.1     ERSSSIAVKEAVSVSKA
Sb028138_Sorbi1 -----------------
BoxShade v3.31 C (beta, 970507) Output
AT2G24260.1     M M N S S L L T P S S S S S S H I Q T P S T T F D H E D F L D Q I F S S - - - - - - - - - - - - A P W - - - - - - - - -
Sb028138_Sorbi1    - - - - - - M Q P - - - S G R E M Q G G G - - - G Q D D F F D Q M L S T L P A A W S D L G S G K S P W E L P A G A G A V
 
AT2G24260.1     - - - P S V V D D A H P L P S D G F H - - - - G H D V D S R N Q P I M M - - - - - - - - - - - - - - - - - - - M P L - -
Sb028138_Sorbi1    P E D A A A Y D E A A L L A S R L R H H Q I G G G G A G A G E K P L M L H L S D L H G L G G G G A G D D A G F M P L P L
 
AT2G24260.1     - - - - - - - - - - - - - - - - N D G S S V H A L Y N G F S V A G - S L P N F Q I P Q G S G G G L M N Q Q - - - - G Q T
Sb028138_Sorbi1    F T D R A R D D M D A A F K S P N A T G A D Q A L Y N G F G A A G M H A A V H Q P P F G Q G G S M P A A Q S F G G G A A
 
AT2G24260.1     Q T Q T Q P Q A S A S T A T G G T V A A P P Q S R T K I R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L
Sb028138_Sorbi1    A A G G A P A P A A G A A S A G G G A A P P R Q Q R Q - R A K R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L
 
AT2G24260.1     V P N G N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A S - - - - V S S Q I S E A G G S H G N A S
Sb028138_Sorbi1    V P N A N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A T A V G P L V A S M A S E G N G N G N G T S
 
AT2G24260.1     S A M V G G S Q T A G N S N D S V T M T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I S T A T C
Sb028138_Sorbi1    D S G N G N A A N G E N G G G S L Q V T E Q Q V A R L M E E D M G T A M Q Y L Q G K G L C L M P I S L A S A I S S A T S
 
AT2G24260.1     H S - - - - - - - - - - - - - R N P L I P G A V A D V G G P S P P N L S G M T I Q S T S T K M G S G N G K L N G N G V T
Sb028138_Sorbi1    S S L L S R P S M G A M G G A R G P L - - - - - H D G G S P A S P P L V N G G D D S R T I K D G - - - G K Q - - - - - -
 
AT2G24260.1     E R S S S I A V K E A V S V S K A
Sb028138_Sorbi1    - - - - - - - - - - - - - - - - -
 
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