fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm042874 not found in 475aa AT2G24260.1 not_1st 0.400715563 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G24260.1     ---------MMNSSLLTPSSSSSSHIQTPSTT---------------FD---HEDFLDQI
gm042874_Glyma1 MQPCSKEMQGLNSLLNSSSQISLQDLQNHTTNQIQNSHMNHQHQLAHFDSTSHDDFLEQM
                          :** * :.*. * ..:*. :*.               **   *:***:*:

AT2G24260.1     FSSAPW------------PSVVDDAHP----LPSDG-----------------------F
gm042874_Glyma1 LSSCSWTDLNPNKPLLWDPNTLNDIKPPDETTPSNNNNDATTNVASFSSFDEHSTLASKF
                :**..*            *..::* :*     **:.                       *

AT2G24260.1     HGHDVDS--------------------RNQPIMMMPL----ND---------------GS
gm042874_Glyma1 RNHQISSNNNAPKNAAAAALMLQHQLLRDSGLLNMPLSLPGNDVVVDASTFESPNPSGKA
                :.*::.*                    *:. :: ***    **                :

AT2G24260.1     SVHALYNGFSVAGSL----------PNFQIPQGSGGGLMNQQ-------GQTQTQTQPQA
gm042874_Glyma1 SVQTFYNGF--AGSLHGVGQSSNQTQHFQHPQGSSNPMQGQNFGAVPAGGGSATNQAPAS
                **:::****  ****           :** ****.. : .*:       * : *:  * :

AT2G24260.1     SASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNKTD
gm042874_Glyma1 GA--AAGG---APAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKTD
                .*  *:**   **.*.* ::***********************************.****

AT2G24260.1     KASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQI----SEAGG--------SHG---
gm042874_Glyma1 KASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGDCIQANGKSNGGGA
                *******************************:*:. :    **.**        *:*   

AT2G24260.1     NASSAMVGGSQTAG--NSNDSVTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI
gm042874_Glyma1 QASTTNTNTNQTTATTTSNDSLTMTEHQVAKLMEEDMGSAMQYLQGKGLCLMPISLATAI
                :**:: .. .**:.  .****:**************************************

AT2G24260.1     STATCHSR----NPLI---------PGAVADVG-GPSPPNLSGMTIQSTSTKMGSGNGKL
gm042874_Glyma1 STATCPTRNVNVNPLINAAAGATHFPTAANPAGEGPSSPSMSVLTVQSA----------I
                ***** :*    ****         * *.  .* ***.*.:* :*:**:          :

AT2G24260.1     NGNGVTERSSSIAVKEAVSVSKA
gm042874_Glyma1 AGN-----------DGAASVSKP
                 **           . *.****.
BoxShade v3.31 C (beta, 970507) Output
AT2G24260.1     - - - - - - - - - M M N S S L L T P S S S S S S H I Q T P S T T - - - - - - - - - - - - - - - F D - - - H E D F L D Q I
gm042874_Glyma1    M Q P C S K E M Q G L N S L L N S S S Q I S L Q D L Q N H T T N Q I Q N S H M N H Q H Q L A H F D S T S H D D F L E Q M
 
AT2G24260.1     F S S A P W - - - - - - - - - - - - P S V V D D A H P - - - - L P S D G - - - - - - - - - - - - - - - - - - - - - - - F
gm042874_Glyma1    L S S C S W T D L N P N K P L L W D P N T L N D I K P P D E T T P S N N N N D A T T N V A S F S S F D E H S T L A S K F
 
AT2G24260.1     H G H D V D S - - - - - - - - - - - - - - - - - - - - R N Q P I M M M P L - - - - N D - - - - - - - - - - - - - - - G S
gm042874_Glyma1    R N H Q I S S N N N A P K N A A A A A L M L Q H Q L L R D S G L L N M P L S L P G N D V V V D A S T F E S P N P S G K A
 
AT2G24260.1     S V H A L Y N G F S V A G S L - - - - - - - - - - P N F Q I P Q G S G G G L M N Q Q - - - - - - - G Q T Q T Q T Q P Q A
gm042874_Glyma1    S V Q T F Y N G F - - A G S L H G V G Q S S N Q T Q H F Q H P Q G S S N P M Q G Q N F G A V P A G G G S A T N Q A P A S
 
AT2G24260.1     S A S T A T G G T V A A P P Q S R T K I R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L V P N G N K T D
gm042874_Glyma1    G A - - A A G G - - - A P A Q P R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q E L V P N A N K T D
 
AT2G24260.1     K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A S V S S Q I - - - - S E A G G - - - - - - - - S H G - - -
gm042874_Glyma1    K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M S S E G G G D C I Q A N G K S N G G G A
 
AT2G24260.1     N A S S A M V G G S Q T A G - - N S N D S V T M T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I
gm042874_Glyma1    Q A S T T N T N T N Q T T A T T T S N D S L T M T E H Q V A K L M E E D M G S A M Q Y L Q G K G L C L M P I S L A T A I
 
AT2G24260.1     S T A T C H S R - - - - N P L I - - - - - - - - - P G A V A D V G - G P S P P N L S G M T I Q S T S T K M G S G N G K L
gm042874_Glyma1    S T A T C P T R N V N V N P L I N A A A G A T H F P T A A N P A G E G P S S P S M S V L T V Q S A - - - - - - - - - - I
 
AT2G24260.1     N G N G V T E R S S S I A V K E A V S V S K A
gm042874_Glyma1    A G N - - - - - - - - - - - D G A A S V S K P
 
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