fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024559 not found in 490aa AT2G24260.1 1st_1st 0.425760286 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G24260.1     -------MMN-SSLLTPSSSSS--------------SHI---------------QTPSTT
gm024559_Glyma0 MQPCSREMQGLNSLLNSSSQISLQDLHNHTTNQIQNSHMNHQHHHQQQQQHQQQQHQLAH
                       * . .***..**. *              **:               *   : 

AT2G24260.1     FD---HEDFLDQIFSSAPW------------PSVVDDAHP----LPSDG-----------
gm024559_Glyma0 FDSTSHDDFLEQMLSSCSWTDLNHNKPLLWDPNTPNDIKPPDETTPSNNNDDATANVVFP
                **   *:***:*::**..*            *.. :* :*     **:.           

AT2G24260.1     -----------FHGHDVDSRNQP-------------------IMMMPL------------
gm024559_Glyma0 SFDEHSTLASKFRNHQISPNNAPKNAAAAAFMLQHQLLRDSGLLNMPLSLPGNDVVDASS
                           *:.*::...* *                   :: ***            

AT2G24260.1     ----NDG--SSVHALYNGFSVAGSL----------PNFQIPQGSGGGLMNQQ-------G
gm024559_Glyma0 FKSPNPGGEASVQALYNGF--AGSLHGAGQSSNQTQHFQNPQGSSNPMQGQNFGAAPAGG
                    * *  :**:******  ****           :** ****.. : .*:       *

AT2G24260.1     QTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMKALQ
gm024559_Glyma0 GGATNQAPGSGA--AAGG---APAQPRQRVRARRGQATDPHSIAERLRRERIAERMKALQ
                   *:  * :.*  *:**   **.*.* ::******************************

AT2G24260.1     ELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQI----SEAGG----
gm024559_Glyma0 ELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMYSEGGGDCIQ
                *****.***********************************:*:. :    **.**    

AT2G24260.1     SHGNASSAMVGGSQTAGN-----------SNDSVTMTEHQVAKLMEEDMGSAMQYLQGKG
gm024559_Glyma0 ANGNSN----GGGAHAPNSNTNQTSATTPSNDSLTMTEHQVAKLMEEDMGSAMQYLQGKG
                ::**:.    **.  * *           ****:**************************

AT2G24260.1     LCLMPISLATAISTATCHSR------NPL--------IPGAVADVG-GPSPPNLSGMTIQ
gm024559_Glyma0 LCLMPISLATAISTATCHTRNVTVNVNPLINAAAAAQIPTAANPAGDGPSSPSMSVLTVQ
                ******************:*      ***        ** *.  .* ***.*.:* :*:*

AT2G24260.1     STSTKMGSGNGKLNGNGVTERSSSIAVKEAVSVSKA
gm024559_Glyma0 S---------------AVAVNDGSAAVKDAASVSKP
                *               .*: ...* ***:*.****.
BoxShade v3.31 C (beta, 970507) Output
AT2G24260.1     - - - - - - - M M N - S S L L T P S S S S S - - - - - - - - - - - - - - S H I - - - - - - - - - - - - - - - Q T P S T T
gm024559_Glyma0    M Q P C S R E M Q G L N S L L N S S S Q I S L Q D L H N H T T N Q I Q N S H M N H Q H H H Q Q Q Q Q H Q Q Q Q H Q L A H
 
AT2G24260.1     F D - - - H E D F L D Q I F S S A P W - - - - - - - - - - - - P S V V D D A H P - - - - L P S D G - - - - - - - - - - -
gm024559_Glyma0    F D S T S H D D F L E Q M L S S C S W T D L N H N K P L L W D P N T P N D I K P P D E T T P S N N N D D A T A N V V F P
 
AT2G24260.1     - - - - - - - - - - - F H G H D V D S R N Q P - - - - - - - - - - - - - - - - - - - I M M M P L - - - - - - - - - - - -
gm024559_Glyma0    S F D E H S T L A S K F R N H Q I S P N N A P K N A A A A A F M L Q H Q L L R D S G L L N M P L S L P G N D V V D A S S
 
AT2G24260.1     - - - - N D G - - S S V H A L Y N G F S V A G S L - - - - - - - - - - P N F Q I P Q G S G G G L M N Q Q - - - - - - - G
gm024559_Glyma0    F K S P N P G G E A S V Q A L Y N G F - - A G S L H G A G Q S S N Q T Q H F Q N P Q G S S N P M Q G Q N F G A A P A G G
 
AT2G24260.1     Q T Q T Q T Q P Q A S A S T A T G G T V A A P P Q S R T K I R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q
gm024559_Glyma0    G G A T N Q A P G S G A - - A A G G - - - A P A Q P R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K A L Q
 
AT2G24260.1     E L V P N G N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A S V S S Q I - - - - S E A G G - - - -
gm024559_Glyma0    E L V P N A N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M Y S E G G G D C I Q
 
AT2G24260.1     S H G N A S S A M V G G S Q T A G N - - - - - - - - - - - S N D S V T M T E H Q V A K L M E E D M G S A M Q Y L Q G K G
gm024559_Glyma0    A N G N S N - - - - G G G A H A P N S N T N Q T S A T T P S N D S L T M T E H Q V A K L M E E D M G S A M Q Y L Q G K G
 
AT2G24260.1     L C L M P I S L A T A I S T A T C H S R - - - - - - N P L - - - - - - - - I P G A V A D V G - G P S P P N L S G M T I Q
gm024559_Glyma0    L C L M P I S L A T A I S T A T C H T R N V T V N V N P L I N A A A A A Q I P T A A N P A G D G P S S P S M S V L T V Q
 
AT2G24260.1     S T S T K M G S G N G K L N G N G V T E R S S S I A V K E A V S V S K A
gm024559_Glyma0    S - - - - - - - - - - - - - - - A V A V N D G S A A V K D A A S V S K P
 
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