fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24260.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm024559 not found in 490aa AT2G24260.1 1st_1st 0.425760286 Ia
Gm042874 not found in 475aa AT2G24260.1 not_1st 0.400715563 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G24260.1     -------MMN-SSLLTPSSSSS--------------SHI---------------QTPSTT
gm042874_Glyma1 MQPCSKEMQGLNSLLNSSSQISLQDLQNHTTNQIQNSHMNH-------------QHQLAH
gm024559_Glyma0 MQPCSREMQGLNSLLNSSSQISLQDLHNHTTNQIQNSHMNHQHHHQQQQQHQQQQHQLAH
                       * . .***..**. *              **:               *   : 

AT2G24260.1     FD---HEDFLDQIFSSAPW------------PSVVDDAHP----LPSDG-----------
gm042874_Glyma1 FDSTSHDDFLEQMLSSCSWTDLNPNKPLLWDPNTLNDIKPPDETTPSNNNNDATTNVASF
gm024559_Glyma0 FDSTSHDDFLEQMLSSCSWTDLNHNKPLLWDPNTPNDIKPPDETTPSNNNDDATANVV-F
                **   *:***:*::**..*            *.. :* :*     **:.           

AT2G24260.1     ------------FHGHDVDS-RNQP-------------------IMMMPL----ND----
gm042874_Glyma1 SSFDEHSTLASKFRNHQISSNNNAPKNAAAAALMLQHQLLRDSGLLNMPLSLPGNDVVVD
gm024559_Glyma0 PSFDEHSTLASKFRNHQISP-NNAPKNAAAAAFMLQHQLLRDSGLLNMPLSLPGND-VVD
                            *:.*::.. .* *                   :: ***    **    

AT2G24260.1     -----------GSSVHALYNGFSVAGSL----------PNFQIPQGSGGGLMNQQ-----
gm042874_Glyma1 ASTFESPNPSGKASVQTFYNGF--AGSLHGVGQSSNQTQHFQHPQGSSNPMQGQNFGAVP
gm024559_Glyma0 ASSFKSPNPGGEASVQALYNGF--AGSLHGAGQSSNQTQHFQNPQGSSNPMQGQNFGAAP
                            :**:::****  ****           :** ****.. : .*:     

AT2G24260.1     --GQTQTQTQPQASASTATGGTVAAPPQSRTKIRARRGQATDPHSIAERLRRERIAERMK
gm042874_Glyma1 AGGGSATNQAPASGA--AAGG---APAQPRQRVRARRGQATDPHSIAERLRRERIAERMK
gm024559_Glyma0 AGGGGATNQAPGSGA--AAGG---APAQPRQRVRARRGQATDPHSIAERLRRERIAERMK
                  *   *:  * :.*  *:**   **.*.* ::***************************

AT2G24260.1     ALQELVPNGNKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAASVSSQI----SEAGGS
gm042874_Glyma1 ALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSSEGGGD
gm024559_Glyma0 ALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMYSEGGGD
                ********.***********************************:*:. :    **.**.

AT2G24260.1     HGNASSAMVGGSQTAG--N-----------SNDSVTMTEHQVAKLMEEDMGSAMQYLQGK
gm042874_Glyma1 CIQANGKSNGGGAQASTTNTNTNQTTATTTSNDSLTMTEHQVAKLMEEDMGSAMQYLQGK
gm024559_Glyma0 CIQANGNSNGGGAHAP--NSNTNQTSATTPSNDSLTMTEHQVAKLMEEDMGSAMQYLQGK
                  :*..   **.  *   *           ****:*************************

AT2G24260.1     GLCLMPISLATAISTATCHSRN------PLI---------PGAVADVG-GPSPPNLSGMT
gm042874_Glyma1 GLCLMPISLATAISTATCPTRN--VNVNPLINAAAGATHFPTAANPAGEGPSSPSMSVLT
gm024559_Glyma0 GLCLMPISLATAISTATCHTRNVTVNVNPLINAAAAA-QIPTAANPAGDGPSSPSMSVLT
                ****************** :**      ***         * *.  .* ***.*.:* :*

AT2G24260.1     IQSTSTKMGSGNGKLNGNGVTERSSSIAVKEAVSVSKA
gm042874_Glyma1 VQS---------------AIAGNDG------AASVSKP
gm024559_Glyma0 VQS---------------AVAVNDGSAAVKDAASVSKP
                :**               .:: ...      *.****.
BoxShade v3.31 C (beta, 970507) Output
AT2G24260.1     - - - - - - - M M N - S S L L T P S S S S S - - - - - - - - - - - - - - S H I - - - - - - - - - - - - - - - Q T P S T T
gm042874_Glyma1    M Q P C S K E M Q G L N S L L N S S S Q I S L Q D L Q N H T T N Q I Q N S H M N H - - - - - - - - - - - - - Q H Q L A H
gm024559_Glyma0    M Q P C S R E M Q G L N S L L N S S S Q I S L Q D L H N H T T N Q I Q N S H M N H Q H H H Q Q Q Q Q H Q Q Q Q H Q L A H
 
AT2G24260.1     F D - - - H E D F L D Q I F S S A P W - - - - - - - - - - - - P S V V D D A H P - - - - L P S D G - - - - - - - - - - -
gm042874_Glyma1    F D S T S H D D F L E Q M L S S C S W T D L N P N K P L L W D P N T L N D I K P P D E T T P S N N N N D A T T N V A S F
gm024559_Glyma0    F D S T S H D D F L E Q M L S S C S W T D L N H N K P L L W D P N T P N D I K P P D E T T P S N N N D D A T A N V V - F
 
AT2G24260.1     - - - - - - - - - - - - F H G H D V D S - R N Q P - - - - - - - - - - - - - - - - - - - I M M M P L - - - - N D - - - -
gm042874_Glyma1    S S F D E H S T L A S K F R N H Q I S S N N N A P K N A A A A A L M L Q H Q L L R D S G L L N M P L S L P G N D V V V D
gm024559_Glyma0    P S F D E H S T L A S K F R N H Q I S P - N N A P K N A A A A A F M L Q H Q L L R D S G L L N M P L S L P G N D - V V D
 
AT2G24260.1     - - - - - - - - - - - G S S V H A L Y N G F S V A G S L - - - - - - - - - - P N F Q I P Q G S G G G L M N Q Q - - - - -
gm042874_Glyma1    A S T F E S P N P S G K A S V Q T F Y N G F - - A G S L H G V G Q S S N Q T Q H F Q H P Q G S S N P M Q G Q N F G A V P
gm024559_Glyma0    A S S F K S P N P G G E A S V Q A L Y N G F - - A G S L H G A G Q S S N Q T Q H F Q N P Q G S S N P M Q G Q N F G A A P
 
AT2G24260.1     - - G Q T Q T Q T Q P Q A S A S T A T G G T V A A P P Q S R T K I R A R R G Q A T D P H S I A E R L R R E R I A E R M K
gm042874_Glyma1    A G G G S A T N Q A P A S G A - - A A G G - - - A P A Q P R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K
gm024559_Glyma0    A G G G G A T N Q A P G S G A - - A A G G - - - A P A Q P R Q R V R A R R G Q A T D P H S I A E R L R R E R I A E R M K
 
AT2G24260.1     A L Q E L V P N G N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A S V S S Q I - - - - S E A G G S
gm042874_Glyma1    A L Q E L V P N A N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M S S E G G G D
gm024559_Glyma0    A L Q E L V P N A N K T D K A S M L D E I I D Y V K F L Q L Q V K V L S M S R L G G A A A V A P L V A D M Y S E G G G D
 
AT2G24260.1     H G N A S S A M V G G S Q T A G - - N - - - - - - - - - - - S N D S V T M T E H Q V A K L M E E D M G S A M Q Y L Q G K
gm042874_Glyma1    C I Q A N G K S N G G G A Q A S T T N T N T N Q T T A T T T S N D S L T M T E H Q V A K L M E E D M G S A M Q Y L Q G K
gm024559_Glyma0    C I Q A N G N S N G G G A H A P - - N S N T N Q T S A T T P S N D S L T M T E H Q V A K L M E E D M G S A M Q Y L Q G K
 
AT2G24260.1     G L C L M P I S L A T A I S T A T C H S R N - - - - - - P L I - - - - - - - - - P G A V A D V G - G P S P P N L S G M T
gm042874_Glyma1    G L C L M P I S L A T A I S T A T C P T R N - - V N V N P L I N A A A G A T H F P T A A N P A G E G P S S P S M S V L T
gm024559_Glyma0    G L C L M P I S L A T A I S T A T C H T R N V T V N V N P L I N A A A A A - Q I P T A A N P A G D G P S S P S M S V L T
 
AT2G24260.1     I Q S T S T K M G S G N G K L N G N G V T E R S S S I A V K E A V S V S K A
gm042874_Glyma1    V Q S - - - - - - - - - - - - - - - A I A G N D G - - - - - - A A S V S K P
gm024559_Glyma0    V Q S - - - - - - - - - - - - - - - A V A V N D G S A A V K D A A S V S K P
 
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