fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24430.1 HMPVSGLNLNLGGALV at 263/316 in AT2G24430.1
EMSQCMDLDGYWPSY at 306/316 in AT2G24430.1
HMPVSGLNLNLGGALV at 263/316 in AT2G24430.2
EMSQCMDLDGYWPSY at 306/316 in AT2G24430.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp023244 not found in 428aa AT5G53950.1 1st_not 0.413559322 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G24430.1     ----MEQGDHQQHKKE--EEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLN
pp023244_Pp1s46 MATACLQGPQGQVQSQHGEPFLPPGFRFHPTDEELVSYYLTNKVLDSSFAVHAIAEVDLN
                      ** : * :.:  *  **************:****.**: *..*: :***:****

AT2G24430.1     KSEPWELPEKAKMGGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSEL
pp023244_Pp1s46 KCEPWDLPEKAKMGEKEWYFFSLRDRKYPTGIRTNRATDAGYWKATGKDRDVFAHGRPPL
                *.***:******** ****************:******::****:****:::*    . *

AT2G24430.1     VGMKKTLVFYRGRAPRGEKTCWVMHEYRLHSKSSYRTS---KQDEWVVCRVFKKTEATK-
pp023244_Pp1s46 VGMKKTLVFYRGRAPKGEKTSWIMHEYRLEGDGGHSLSPRVNKDEWVVCRIFQKNSGGKG
                ***************:****.*:******.....:  *   ::*******:*:*... * 

AT2G24430.1     KYISTSSSSTSH---HHNNHTRASILST-NNNNPNYS-------------SDLLQLPPHL
pp023244_Pp1s46 SFLFSDSCMRSHAVMYQIEDTRSSLPPVMNNNSPNPTVTDGGTCTDCETCAGTEQMPA--
                .:: :.*.  **   :: :.**:*: .. ***.** :             :.  *:*.  

AT2G24430.1     QPHPSLNINQSLMANAV----HLAELSRVFR--ASTSTTMDSSHQ--QLMNYTHM-----
pp023244_Pp1s46 ------------CYNCVDDFDHGKETNSVMSWINAQSTGMDILQQVGDLNNLSNMLSKQY
                              *.*    *  * . *:    : ** **  :*  :* * ::*     

AT2G24430.1     PV------SGLNLN--LG---GALVQPP----P----VVSL------------EDVA---
pp023244_Pp1s46 PVYDAAYEKGMSLSRQLGFTPQVLLQPANMTTPTGLRVTSLRPKTEPSSFSEGEDEAQSI
                **      .*:.*.  **    .*:**.    *    *.**            ** *   

AT2G24430.1     -------------AVSASYNGENG------------FGNVEMSQCMDLDGYWPS------
pp023244_Pp1s46 PEGYGYDGWQAEDAEASLYNNNDGTADDSSSPLQSSTGGTELS-C--LSGSFCSGDHMNN
                             * :: **.::*             *..*:* *  *.* : *      

AT2G24430.1     --Y----------------------
pp023244_Pp1s46 FKYRLQDITALADSGLGTEILGWCC
                  *
BoxShade v3.31 C (beta, 970507) Output
AT2G24430.1     - - - - M E Q G D H Q Q H K K E - - E E A L P P G F R F H P T D E E L I S Y Y L V N K I A D Q N F T G K A I A D V D L N
pp023244_Pp1s46    M A T A C L Q G P Q G Q V Q S Q H G E P F L P P G F R F H P T D E E L V S Y Y L T N K V L D S S F A V H A I A E V D L N
 
AT2G24430.1     K S E P W E L P E K A K M G G K E W Y F F S L R D R K Y P T G V R T N R A T N T G Y W K T T G K D K E I F N S T T S E L
pp023244_Pp1s46    K C E P W D L P E K A K M G E K E W Y F F S L R D R K Y P T G I R T N R A T D A G Y W K A T G K D R D V F A H G R P P L
 
AT2G24430.1     V G M K K T L V F Y R G R A P R G E K T C W V M H E Y R L H S K S S Y R T S - - - K Q D E W V V C R V F K K T E A T K -
pp023244_Pp1s46    V G M K K T L V F Y R G R A P K G E K T S W I M H E Y R L E G D G G H S L S P R V N K D E W V V C R I F Q K N S G G K G
 
AT2G24430.1     K Y I S T S S S S T S H - - - H H N N H T R A S I L S T - N N N N P N Y S - - - - - - - - - - - - - S D L L Q L P P H L
pp023244_Pp1s46    S F L F S D S C M R S H A V M Y Q I E D T R S S L P P V M N N N S P N P T V T D G G T C T D C E T C A G T E Q M P A - -
 
AT2G24430.1     Q P H P S L N I N Q S L M A N A V - - - - H L A E L S R V F R - - A S T S T T M D S S H Q - - Q L M N Y T H M - - - - -
pp023244_Pp1s46    - - - - - - - - - - - - C Y N C V D D F D H G K E T N S V M S W I N A Q S T G M D I L Q Q V G D L N N L S N M L S K Q Y
 
AT2G24430.1     P V - - - - - - S G L N L N - - L G - - - G A L V Q P P - - - - P - - - - V V S L - - - - - - - - - - - - E D V A - - -
pp023244_Pp1s46    P V Y D A A Y E K G M S L S R Q L G F T P Q V L L Q P A N M T T P T G L R V T S L R P K T E P S S F S E G E D E A Q S I
 
AT2G24430.1     - - - - - - - - - - - - - A V S A S Y N G E N G - - - - - - - - - - - - F G N V E M S Q C M D L D G Y W P S - - - - - -
pp023244_Pp1s46    P E G Y G Y D G W Q A E D A E A S L Y N N N D G T A D D S S S P L Q S S T G G T E L S - C - - L S G S F C S G D H M N N
 
AT2G24430.1     - - Y - - - - - - - - - - - - - - - - - - - - - -
pp023244_Pp1s46    F K Y R L Q D I T A L A D S G L G T E I L G W C C
 
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