fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24430.1 HMPVSGLNLNLGGALV at 263/316 in AT2G24430.1
EMSQCMDLDGYWPSY at 306/316 in AT2G24430.1
HMPVSGLNLNLGGALV at 263/316 in AT2G24430.2
EMSQCMDLDGYWPSY at 306/316 in AT2G24430.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp029701 not found in 425aa AT5G61430.1 not_not 0.411864406 III
Pp028835 not found in 424aa AT5G53950.1 not_not 0.405084745 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G24430.1     ------MEQGDHQQHKKEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLN
pp029701_Pp1s22 MADTSVQGPQDTDQSQQGEPFLPPGFRFHPTDEELVSYYLTKKVLDSRFTVHAIAEVDLN
pp028835_Pp1s28 MAAPWHQEPQGKDQSQRVESFLPPGFRFHPTDEELVSYYLTKKVLDSRFAVRAIAEVDLN
                          . :* :: *  **************:****.:*: *..*: :***:****

AT2G24430.1     KSEPWELPEKAKMGGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSEL
pp029701_Pp1s22 KCEPWDLPVKAKMGEKEWYFFSLRDRKYPTGMRTNRATDAGYWKATGKDRDVFAHGRSHL
pp028835_Pp1s28 KCEPWDLPEKAKMGEKEWYFFSLRDRKYPTGMRTNRATDAGYWKATGKDRDVLAHGRPRL
                *.***:** ***** ****************:******::****:****::::    ..*

AT2G24430.1     VGMKKTLVFYRGRAPRGEKTCWVMHEYRLHSKSSY----RTSKQDEWVVCRVFKKTEATK
pp029701_Pp1s22 VGMKKTLVFYRGRAPKGEKTNWIMHEYRLEGDGGHSLPPRVNK-DEWVVCRIFQKSSGAK
pp028835_Pp1s28 IGMKKTLVFYMGRAPKGEKTNWIMHEYRLENDGGHPLSPRANK-DEWVVCRIFEKSSGGK
                :********* ****:**** *:******.....:    *..* *******:*:*:.. *

AT2G24430.1     KYISTSSSSTSH---HHNNHTRASILSTNNNNPNYSSDLLQLPPHL---QPHPSLNINQS
pp029701_Pp1s22 RSFLFSDSRMRQAIVYQLEDVRSS-----------------LPPDMDNNSPNPTV-TDGG
pp028835_Pp1s28 RGFSMSESHMRQGMAYQLEDARSS-----------------LPPLMDNESPNPTV-IDER
                : :  *.*   :   :: :..*:*                 *** :   .*:*::  :  

AT2G24430.1     LMANAVHLAELSRVFRASTSTTMDSSHQQ----LMNYTHMPVSGLNL--------NLGGA
pp029701_Pp1s22 TCTDCETCAGTEQMS-ACYNCVHDFDHDKDTNGVMSWINTQPAGMDILQQVGGLNNLNNL
pp028835_Pp1s28 TATNCETFVETEQMS--CYNRVQDFDHKKEMNCVMSWINVQPAGMDMVPQVGGLSSLDNG
                  ::.   .  .::   . . . * .*.:    :*.: :   :*:::        .*.. 

AT2G24430.1     LVQPPP------------------------------------VVSL------------ED
pp029701_Pp1s22 LSKPYPMYDASYEKGMNLPRQLGFTPQVLMQPANMTTPTGLRVASLRPKTEPSSFSEGED
pp028835_Pp1s28 LPKPYPGNEIC-EKSMSLSRQAGFNQQALMQSANMTTTTGFRVTSLRPKTEPLSFSEGED
                * :* *                                    *.**            **

AT2G24430.1     VA----------------AVSASYNG-----------ENGFGNVEMSQCM----------
pp029701_Pp1s22 EAQSIPEGYEYGAWQTEKAEASLYNNDGTGDDSSSPLQSSTGGTELS-CLTGSLCSGENG
pp028835_Pp1s28 EAQSTQKGCDYVNWPADLAGASLYQNDGTEGDSSSPLQSSTGGTDLS-CLTGSLCSGENM
                 *                * :: *:.           :.. *..::* *:          

AT2G24430.1     ---------DL-----DGYWPSY-----
pp029701_Pp1s22 S--YKYRLPDITAPVDAGFGHEILTWAY
pp028835_Pp1s28 SFDFKYRLQDITAPVDSGHGPEIIGWA-
                         *:      *.  .
BoxShade v3.31 C (beta, 970507) Output
AT2G24430.1     - - - - - - M E Q G D H Q Q H K K E E E A L P P G F R F H P T D E E L I S Y Y L V N K I A D Q N F T G K A I A D V D L N
pp029701_Pp1s22    M A D T S V Q G P Q D T D Q S Q Q G E P F L P P G F R F H P T D E E L V S Y Y L T K K V L D S R F T V H A I A E V D L N
pp028835_Pp1s28    M A A P W H Q E P Q G K D Q S Q R V E S F L P P G F R F H P T D E E L V S Y Y L T K K V L D S R F A V R A I A E V D L N
 
AT2G24430.1     K S E P W E L P E K A K M G G K E W Y F F S L R D R K Y P T G V R T N R A T N T G Y W K T T G K D K E I F N S T T S E L
pp029701_Pp1s22    K C E P W D L P V K A K M G E K E W Y F F S L R D R K Y P T G M R T N R A T D A G Y W K A T G K D R D V F A H G R S H L
pp028835_Pp1s28    K C E P W D L P E K A K M G E K E W Y F F S L R D R K Y P T G M R T N R A T D A G Y W K A T G K D R D V L A H G R P R L
 
AT2G24430.1     V G M K K T L V F Y R G R A P R G E K T C W V M H E Y R L H S K S S Y - - - - R T S K Q D E W V V C R V F K K T E A T K
pp029701_Pp1s22    V G M K K T L V F Y R G R A P K G E K T N W I M H E Y R L E G D G G H S L P P R V N K - D E W V V C R I F Q K S S G A K
pp028835_Pp1s28    I G M K K T L V F Y M G R A P K G E K T N W I M H E Y R L E N D G G H P L S P R A N K - D E W V V C R I F E K S S G G K
 
AT2G24430.1     K Y I S T S S S S T S H - - - H H N N H T R A S I L S T N N N N P N Y S S D L L Q L P P H L - - - Q P H P S L N I N Q S
pp029701_Pp1s22    R S F L F S D S R M R Q A I V Y Q L E D V R S S - - - - - - - - - - - - - - - - - L P P D M D N N S P N P T V - T D G G
pp028835_Pp1s28    R G F S M S E S H M R Q G M A Y Q L E D A R S S - - - - - - - - - - - - - - - - - L P P L M D N E S P N P T V - I D E R
 
AT2G24430.1     L M A N A V H L A E L S R V F R A S T S T T M D S S H Q Q - - - - L M N Y T H M P V S G L N L - - - - - - - - N L G G A
pp029701_Pp1s22    T C T D C E T C A G T E Q M S - A C Y N C V H D F D H D K D T N G V M S W I N T Q P A G M D I L Q Q V G G L N N L N N L
pp028835_Pp1s28    T A T N C E T F V E T E Q M S - - C Y N R V Q D F D H K K E M N C V M S W I N V Q P A G M D M V P Q V G G L S S L D N G
 
AT2G24430.1     L V Q P P P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V V S L - - - - - - - - - - - - E D
pp029701_Pp1s22    L S K P Y P M Y D A S Y E K G M N L P R Q L G F T P Q V L M Q P A N M T T P T G L R V A S L R P K T E P S S F S E G E D
pp028835_Pp1s28    L P K P Y P G N E I C - E K S M S L S R Q A G F N Q Q A L M Q S A N M T T T T G F R V T S L R P K T E P L S F S E G E D
 
AT2G24430.1     V A - - - - - - - - - - - - - - - - A V S A S Y N G - - - - - - - - - - - E N G F G N V E M S Q C M - - - - - - - - - -
pp029701_Pp1s22    E A Q S I P E G Y E Y G A W Q T E K A E A S L Y N N D G T G D D S S S P L Q S S T G G T E L S - C L T G S L C S G E N G
pp028835_Pp1s28    E A Q S T Q K G C D Y V N W P A D L A G A S L Y Q N D G T E G D S S S P L Q S S T G G T D L S - C L T G S L C S G E N M
 
AT2G24430.1     - - - - - - - - - D L - - - - - D G Y W P S Y - - - - -
pp029701_Pp1s22    S - - Y K Y R L P D I T A P V D A G F G H E I L T W A Y
pp028835_Pp1s28    S F D F K Y R L Q D I T A P V D S G H G P E I I G W A -
 
0