fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24430.1 HMPVSGLNLNLGGALV at 263/316 in AT2G24430.1
EMSQCMDLDGYWPSY at 306/316 in AT2G24430.1
HMPVSGLNLNLGGALV at 263/316 in AT2G24430.2
EMSQCMDLDGYWPSY at 306/316 in AT2G24430.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp023244 not found in 428aa AT5G53950.1 1st_not 0.413559322 II
Pp029701 not found in 425aa AT5G61430.1 not_not 0.411864406 III
Pp028835 not found in 424aa AT5G53950.1 not_not 0.405084745 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G24430.1     MEQGDHQ------QHKKEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLN
pp029701_Pp1s22 MADTSVQGPQDTDQSQQGEPFLPPGFRFHPTDEELVSYYLTKKVLDSRFTVHAIAEVDLN
pp023244_Pp1s46 MATACLQGPQGQVQSQHGEPFLPPGFRFHPTDEELVSYYLTNKVLDSSFAVHAIAEVDLN
pp028835_Pp1s28 MAAPWHQEPQGKDQSQRVESFLPPGFRFHPTDEELVSYYLTKKVLDSRFAVRAIAEVDLN
                *     *      * :: *  **************:****.:*: *. *: :***:****

AT2G24430.1     KSEPWELPEKAKMGGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSEL
pp029701_Pp1s22 KCEPWDLPVKAKMGEKEWYFFSLRDRKYPTGMRTNRATDAGYWKATGKDRDVFAHGRSHL
pp023244_Pp1s46 KCEPWDLPEKAKMGEKEWYFFSLRDRKYPTGIRTNRATDAGYWKATGKDRDVFAHGRPPL
pp028835_Pp1s28 KCEPWDLPEKAKMGEKEWYFFSLRDRKYPTGMRTNRATDAGYWKATGKDRDVLAHGRPRL
                *.***:** ***** ****************:******::****:****::::    . *

AT2G24430.1     VGMKKTLVFYRGRAPRGEKTCWVMHEYRLHSKSSYRTS---KQDEWVVCRVFKKTEATKK
pp029701_Pp1s22 VGMKKTLVFYRGRAPKGEKTNWIMHEYRLEGDGGHSLPPRVNKDEWVVCRIFQKSSGAKR
pp023244_Pp1s46 VGMKKTLVFYRGRAPKGEKTSWIMHEYRLEGDGGHSLSPRVNKDEWVVCRIFQKNSGGKG
pp028835_Pp1s28 IGMKKTLVFYMGRAPKGEKTNWIMHEYRLENDGGHPLSPRANKDEWVVCRIFEKSSGGKR
                :********* ****:**** *:******.....:  .   ::*******:*:*... * 

AT2G24430.1     YISTSSSSTS----HHHNNHTRASILSTNNNNPNYSSDLLQLPPHLQPHPSLNINQSLMA
pp029701_Pp1s22 SFLFSDSRMR-QAIVYQLEDVRSSLPPDMDNN--------------SPNPTV-TDGGTCT
pp023244_Pp1s46 SFLFSDSCMRSHAVMYQIEDTRSSLPPVMNNN--------------SPNPTV-TDGGTCT
pp028835_Pp1s28 GFSMSESHMR-QGMAYQLEDARSSLPPLMDNE--------------SPNPTV-IDERTAT
                 :  *.*        :: :..*:*: .  :*:              .*:*::  :    :

AT2G24430.1     NAVHLAELSRVFRASTSTTMDSSHQQ----LMNYTHMPVSGLNL--------NLGGALVQ
pp029701_Pp1s22 DCETCAGTEQMS-ACYNCVHDFDHDKDTNGVMSWINTQPAGMDILQQVGGLNNLNNLLSK
pp023244_Pp1s46 DCETCAGTEQMP-ACYNCVDDFDHGKETNSVMSWINAQSTGMDILQQVGDLNNLSNMLSK
pp028835_Pp1s28 NCETFVETEQMS--CYNRVQDFDHKKEMNCVMSWINVQPAGMDMVPQVGGLSSLDNGLPK
                :.   .  .::   . . . * .* :    :*.: :   :*:::        .*.. * :

AT2G24430.1     PPP------------------------------------VVSL------------EDVA-
pp029701_Pp1s22 PYPMYDASYEKGMNLPRQLGFTPQVLMQPANMTTPTGLRVASLRPKTEPSSFSEGEDEAQ
pp023244_Pp1s46 QYPVYDAAYEKGMSLSRQLGFTPQVLLQPANMTTPTGLRVTSLRPKTEPSSFSEGEDEAQ
pp028835_Pp1s28 PYPGNEIC-EKSMSLSRQAGFNQQALMQSANMTTTTGFRVTSLRPKTEPLSFSEGEDEAQ
                  *                                    *.**            ** * 

AT2G24430.1     ---------------AVSASYNGENG------------FGNVEMSQCM------------
pp029701_Pp1s22 SIPEGYEYGAWQTEKAEASLY-NNDGTGDDSSSPLQSSTGGTELS-CLTGSLCSGEN-G-
pp023244_Pp1s46 SIPEGYGYDGWQAEDAEASLYNNNDGTADDSSSPLQSSTGGTELS-CLSGSFCSGDHMN-
pp028835_Pp1s28 STQKGCDYVNWPADLAGASLY-QNDGTEGDSSSPLQSSTGGTDLS-CLTGSLCSGENMSF
                               * :: *  ::*             *..::* *:            

AT2G24430.1     -------DL-----DGYWPSY-----
pp029701_Pp1s22 SYKYRLPDITAPVDAGFGHEILTWAY
pp023244_Pp1s46 NFKYRLQDITALADSGLGTEILGWCC
pp028835_Pp1s28 DFKYRLQDITAPVDSGHGPEIIGWA-
                       *:      *   .
BoxShade v3.31 C (beta, 970507) Output
AT2G24430.1     M E Q G D H Q - - - - - - Q H K K E E E A L P P G F R F H P T D E E L I S Y Y L V N K I A D Q N F T G K A I A D V D L N
pp029701_Pp1s22    M A D T S V Q G P Q D T D Q S Q Q G E P F L P P G F R F H P T D E E L V S Y Y L T K K V L D S R F T V H A I A E V D L N
pp023244_Pp1s46    M A T A C L Q G P Q G Q V Q S Q H G E P F L P P G F R F H P T D E E L V S Y Y L T N K V L D S S F A V H A I A E V D L N
pp028835_Pp1s28    M A A P W H Q E P Q G K D Q S Q R V E S F L P P G F R F H P T D E E L V S Y Y L T K K V L D S R F A V R A I A E V D L N
 
AT2G24430.1     K S E P W E L P E K A K M G G K E W Y F F S L R D R K Y P T G V R T N R A T N T G Y W K T T G K D K E I F N S T T S E L
pp029701_Pp1s22    K C E P W D L P V K A K M G E K E W Y F F S L R D R K Y P T G M R T N R A T D A G Y W K A T G K D R D V F A H G R S H L
pp023244_Pp1s46    K C E P W D L P E K A K M G E K E W Y F F S L R D R K Y P T G I R T N R A T D A G Y W K A T G K D R D V F A H G R P P L
pp028835_Pp1s28    K C E P W D L P E K A K M G E K E W Y F F S L R D R K Y P T G M R T N R A T D A G Y W K A T G K D R D V L A H G R P R L
 
AT2G24430.1     V G M K K T L V F Y R G R A P R G E K T C W V M H E Y R L H S K S S Y R T S - - - K Q D E W V V C R V F K K T E A T K K
pp029701_Pp1s22    V G M K K T L V F Y R G R A P K G E K T N W I M H E Y R L E G D G G H S L P P R V N K D E W V V C R I F Q K S S G A K R
pp023244_Pp1s46    V G M K K T L V F Y R G R A P K G E K T S W I M H E Y R L E G D G G H S L S P R V N K D E W V V C R I F Q K N S G G K G
pp028835_Pp1s28    I G M K K T L V F Y M G R A P K G E K T N W I M H E Y R L E N D G G H P L S P R A N K D E W V V C R I F E K S S G G K R
 
AT2G24430.1     Y I S T S S S S T S - - - - H H H N N H T R A S I L S T N N N N P N Y S S D L L Q L P P H L Q P H P S L N I N Q S L M A
pp029701_Pp1s22    S F L F S D S R M R - Q A I V Y Q L E D V R S S L P P D M D N N - - - - - - - - - - - - - - S P N P T V - T D G G T C T
pp023244_Pp1s46    S F L F S D S C M R S H A V M Y Q I E D T R S S L P P V M N N N - - - - - - - - - - - - - - S P N P T V - T D G G T C T
pp028835_Pp1s28    G F S M S E S H M R - Q G M A Y Q L E D A R S S L P P L M D N E - - - - - - - - - - - - - - S P N P T V - I D E R T A T
 
AT2G24430.1     N A V H L A E L S R V F R A S T S T T M D S S H Q Q - - - - L M N Y T H M P V S G L N L - - - - - - - - N L G G A L V Q
pp029701_Pp1s22    D C E T C A G T E Q M S - A C Y N C V H D F D H D K D T N G V M S W I N T Q P A G M D I L Q Q V G G L N N L N N L L S K
pp023244_Pp1s46    D C E T C A G T E Q M P - A C Y N C V D D F D H G K E T N S V M S W I N A Q S T G M D I L Q Q V G D L N N L S N M L S K
pp028835_Pp1s28    N C E T F V E T E Q M S - - C Y N R V Q D F D H K K E M N C V M S W I N V Q P A G M D M V P Q V G G L S S L D N G L P K
 
AT2G24430.1     P P P - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V V S L - - - - - - - - - - - - E D V A -
pp029701_Pp1s22    P Y P M Y D A S Y E K G M N L P R Q L G F T P Q V L M Q P A N M T T P T G L R V A S L R P K T E P S S F S E G E D E A Q
pp023244_Pp1s46    Q Y P V Y D A A Y E K G M S L S R Q L G F T P Q V L L Q P A N M T T P T G L R V T S L R P K T E P S S F S E G E D E A Q
pp028835_Pp1s28    P Y P G N E I C - E K S M S L S R Q A G F N Q Q A L M Q S A N M T T T T G F R V T S L R P K T E P L S F S E G E D E A Q
 
AT2G24430.1     - - - - - - - - - - - - - - - A V S A S Y N G E N G - - - - - - - - - - - - F G N V E M S Q C M - - - - - - - - - - - -
pp029701_Pp1s22    S I P E G Y E Y G A W Q T E K A E A S L Y - N N D G T G D D S S S P L Q S S T G G T E L S - C L T G S L C S G E N - G -
pp023244_Pp1s46    S I P E G Y G Y D G W Q A E D A E A S L Y N N N D G T A D D S S S P L Q S S T G G T E L S - C L S G S F C S G D H M N -
pp028835_Pp1s28    S T Q K G C D Y V N W P A D L A G A S L Y - Q N D G T E G D S S S P L Q S S T G G T D L S - C L T G S L C S G E N M S F
 
AT2G24430.1     - - - - - - - D L - - - - - D G Y W P S Y - - - - -
pp029701_Pp1s22    S Y K Y R L P D I T A P V D A G F G H E I L T W A Y
pp023244_Pp1s46    N F K Y R L Q D I T A L A D S G L G T E I L G W C C
pp028835_Pp1s28    D F K Y R L Q D I T A P V D S G H G P E I I G W A -
 
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