fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24430.1 HMPVSGLNLNLGGALV at 263/316 in AT2G24430.1
EMSQCMDLDGYWPSY at 306/316 in AT2G24430.1
HMPVSGLNLNLGGALV at 263/316 in AT2G24430.2
EMSQCMDLDGYWPSY at 306/316 in AT2G24430.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os013975 not found in 323aa AT3G18400.1 not_not 0.420338983 III
Os024821 RAIAEIDLNKCEPWELPE in 58/373 AT5G53950.1 not_not 0.406779661 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G24430.1     MEQ-------GDHQQHKKEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDL
Os013975_Os03t0 MEE-------G-----------LPPGFRFHPTDEELVTYYLARKVSDFGFATRAIADVDL
Os024821_Os06t0 MERCSVLGLGGGGGGGGRLDGELPPGFRFHPTDEELITYYLLRKVVDGSFNGRAIAEIDL
                **.       *           **************::*** .*: * .*  :***::**

AT2G24430.1     NKSEPWELPEKAKMGGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSE
Os013975_Os03t0 NKCEPWDLPSKASMGEKEWYFFSMRDRKYPTGIRTNRATDSGYWKTTGKDKEIFHG--GA
Os024821_Os06t0 NKCEPWELPEKAKMGEKEWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREIRSARTGA
                **.***:**.**.** *****:*:********:******.:****:****:**  .  . 

AT2G24430.1     LVGMKKTLVFYRGRAPRGEKTCWVMHEYRLHSKSSYR---TSKQDEWVVCRVFKKTEATK
Os013975_Os03t0 LAGMKKTLVFYRGRAPKGAKTSWVMHEYRLQSKFPYK---PAK-DEWVVCRVFKKLQC--
Os024821_Os06t0 LVGMKKTLVFYRGRAPKGQKTQWVMHEYRLDGTYAYHFLSSSTRDEWVIARIFTK-----
                *.**************:* ** ********... .*:   .:. ****:.*:*.*     

AT2G24430.1     KYISTSSSSTSHHHNNHTRASILSTNNNNPNYSSDLLQLPPHLQPHPS------LNINQS
Os013975_Os03t0 ---HLAKPRPPHDDVDGDGAS------------------PPEMVDASSLGELGELDVSSI
Os024821_Os06t0 ----------------------------------------PGVFPVVRKGRLG-------
                                                        * :                 

AT2G24430.1     LM---------------------------ANAVHLAELSRVFRASTSTTMDSSHQQLMNY
Os013975_Os03t0 LLGG------FAPPSGELCHGGGGGDGFGAHRLHVGAYMSWLQAAA-----AANQGMFQW
Os024821_Os06t0 ISGGGGDTSCFSDSTSASVGGGGGTSASSALRAPLAE-ASLFAAAAAPAVDGADSS--NY
                :                            *    :.     : *::     .:..   ::

AT2G24430.1     -------THMPVSGL-------------------NLNLGGALVQPPPV------------
Os013975_Os03t0 -------PAATQAGLVGGTVF-----AAAHKAAGTMPFGGGCSQQQARDV----------
Os024821_Os06t0 GGGGGAGSATATANLVTGLELVPCFSTTAHM---DASFGTGQYNPAPLAVEPPPPPPAFF
                       .  . :.*                      :* .  :  .             

AT2G24430.1     -----------------------VSLEDVAAVSASYNGENGFGNVEMSQC----------
Os013975_Os03t0 ----------------------GVSLANVGGGDALFGGAP-LAKVDM-ECGEQAPQL---
Os024821_Os06t0 PSLRSLQENLQLPLFLSGGMQAGVSSQPLSGGGAFHWQSGMDVKVEG-AVGRAPPQMAVG
                                       **   :.. .* .       :*:              

AT2G24430.1     ---MDLDGYWPSY
Os013975_Os03t0 --DMD-DSTWRAF
Os024821_Os06t0 PGQLDGAFAWGF-
                   :*    *
BoxShade v3.31 C (beta, 970507) Output
AT2G24430.1     M E Q - - - - - - - G D H Q Q H K K E E E A L P P G F R F H P T D E E L I S Y Y L V N K I A D Q N F T G K A I A D V D L
Os013975_Os03t0    M E E - - - - - - - G - - - - - - - - - - - L P P G F R F H P T D E E L V T Y Y L A R K V S D F G F A T R A I A D V D L
Os024821_Os06t0    M E R C S V L G L G G G G G G G G R L D G E L P P G F R F H P T D E E L I T Y Y L L R K V V D G S F N G R A I A E I D L
 
AT2G24430.1     N K S E P W E L P E K A K M G G K E W Y F F S L R D R K Y P T G V R T N R A T N T G Y W K T T G K D K E I F N S T T S E
Os013975_Os03t0    N K C E P W D L P S K A S M G E K E W Y F F S M R D R K Y P T G I R T N R A T D S G Y W K T T G K D K E I F H G - - G A
Os024821_Os06t0    N K C E P W E L P E K A K M G E K E W Y F Y S L R D R K Y P T G L R T N R A T G A G Y W K A T G K D R E I R S A R T G A
 
AT2G24430.1     L V G M K K T L V F Y R G R A P R G E K T C W V M H E Y R L H S K S S Y R - - - T S K Q D E W V V C R V F K K T E A T K
Os013975_Os03t0    L A G M K K T L V F Y R G R A P K G A K T S W V M H E Y R L Q S K F P Y K - - - P A K - D E W V V C R V F K K L Q C - -
Os024821_Os06t0    L V G M K K T L V F Y R G R A P K G Q K T Q W V M H E Y R L D G T Y A Y H F L S S S T R D E W V I A R I F T K - - - - -
 
AT2G24430.1     K Y I S T S S S S T S H H H N N H T R A S I L S T N N N N P N Y S S D L L Q L P P H L Q P H P S - - - - - - L N I N Q S
Os013975_Os03t0    - - - H L A K P R P P H D D V D G D G A S - - - - - - - - - - - - - - - - - - P P E M V D A S S L G E L G E L D V S S I
Os024821_Os06t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P G V F P V V R K G R L G - - - - - - -
 
AT2G24430.1     L M - - - - - - - - - - - - - - - - - - - - - - - - - - - A N A V H L A E L S R V F R A S T S T T M D S S H Q Q L M N Y
Os013975_Os03t0    L L G G - - - - - - F A P P S G E L C H G G G G G D G F G A H R L H V G A Y M S W L Q A A A - - - - - A A N Q G M F Q W
Os024821_Os06t0    I S G G G G D T S C F S D S T S A S V G G G G G T S A S S A L R A P L A E - A S L F A A A A A P A V D G A D S S - - N Y
 
AT2G24430.1     - - - - - - - T H M P V S G L - - - - - - - - - - - - - - - - - - - N L N L G G A L V Q P P P V - - - - - - - - - - - -
Os013975_Os03t0    - - - - - - - P A A T Q A G L V G G T V F - - - - - A A A H K A A G T M P F G G G C S Q Q Q A R D V - - - - - - - - - -
Os024821_Os06t0    G G G G G A G S A T A T A N L V T G L E L V P C F S T T A H M - - - D A S F G T G Q Y N P A P L A V E P P P P P P A F F
 
AT2G24430.1     - - - - - - - - - - - - - - - - - - - - - - - V S L E D V A A V S A S Y N G E N G F G N V E M S Q C - - - - - - - - - -
Os013975_Os03t0    - - - - - - - - - - - - - - - - - - - - - - G V S L A N V G G G D A L F G G A P - L A K V D M - E C G E Q A P Q L - - -
Os024821_Os06t0    P S L R S L Q E N L Q L P L F L S G G M Q A G V S S Q P L S G G G A F H W Q S G M D V K V E G - A V G R A P P Q M A V G
 
AT2G24430.1     - - - M D L D G Y W P S Y
Os013975_Os03t0    - - D M D - D S T W R A F
Os024821_Os06t0    P G Q L D G A F A W G F -
 
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