fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24430.1 HMPVSGLNLNLGGALV at 263/316 in AT2G24430.1
EMSQCMDLDGYWPSY at 306/316 in AT2G24430.1
HMPVSGLNLNLGGALV at 263/316 in AT2G24430.2
EMSQCMDLDGYWPSY at 306/316 in AT2G24430.2
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb000733 not found in 341aa AT3G18400.1 not_not 0.420338983 III
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G24430.1     MEQGDHQQHKKEEEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWE
Sb000733_Sorbi1 MEEG-----------LPPGFRFHPTDEELVTYYLTRKVSDFAFATRAIADVDLNKCEPWD
                **:*           **************::***..*::*  *: :*********.***:

AT2G24430.1     LPEKAKMGGKEWYFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKT
Sb000733_Sorbi1 LPSKASMGEKEWYFFSMRDRKYPTGIRTNRATDSGYWKTTGKDKEIFHCGM--LVGMKKT
                **.**.** *******:********:******::*************:.    *******

AT2G24430.1     LVFYRGRAPRGEKTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKKY--------
Sb000733_Sorbi1 LVFYRGRAPKGQKTSWVMHEYRLQNKFPYKPNKE-EWVVCRVFKKCQVIKMRPPQDSPTM
                *********:*:**.********:.* .*:..*: ********** :. *          

AT2G24430.1     --------------------------ISTSSSSTS--------HHHNNHTRASILSTNNN
Sb000733_Sorbi1 GSPCHDAGNASLGELGELDVSSILGGLAAAAAHTSSGSPPGVLHHQGSAAAAESFVGAHN
                                          :::::: **        **:.. : *. :   :*

AT2G24430.1     NPNYSSDLLQLPPHLQPHPSLNINQSLMANAVHLAELSRVFRASTSTT---------MDS
Sb000733_Sorbi1 RP----------------VDMSAYMSWMAAANQGAAAAAAMLPWATTTPPGLFGNVFAPN
                .*                 .:.   * ** * : *  : .: . ::**           .

AT2G24430.1     SHQQLMNYTHMP----VSGLNLNLGGALVQPPPVVSLEDVAAVSASYNGENG-FGNVEMS
Sb000733_Sorbi1 NHQLLQK--PLPFAGGCSGQPRGLGGVVANNVVVGS------------GEHAMFGSSVVK
                .** * :   :*     **   .***.:.:   * *            **:. **.  :.

AT2G24430.1     QCMDLD-------------GYWPSY
Sb000733_Sorbi1 VGMECDQQQQPEQQLGMDESTWRTF
                  *: *             . * ::
BoxShade v3.31 C (beta, 970507) Output
AT2G24430.1     M E Q G D H Q Q H K K E E E A L P P G F R F H P T D E E L I S Y Y L V N K I A D Q N F T G K A I A D V D L N K S E P W E
Sb000733_Sorbi1    M E E G - - - - - - - - - - - L P P G F R F H P T D E E L V T Y Y L T R K V S D F A F A T R A I A D V D L N K C E P W D
 
AT2G24430.1     L P E K A K M G G K E W Y F F S L R D R K Y P T G V R T N R A T N T G Y W K T T G K D K E I F N S T T S E L V G M K K T
Sb000733_Sorbi1    L P S K A S M G E K E W Y F F S M R D R K Y P T G I R T N R A T D S G Y W K T T G K D K E I F H C G M - - L V G M K K T
 
AT2G24430.1     L V F Y R G R A P R G E K T C W V M H E Y R L H S K S S Y R T S K Q D E W V V C R V F K K T E A T K K Y - - - - - - - -
Sb000733_Sorbi1    L V F Y R G R A P K G Q K T S W V M H E Y R L Q N K F P Y K P N K E - E W V V C R V F K K C Q V I K M R P P Q D S P T M
 
AT2G24430.1     - - - - - - - - - - - - - - - - - - - - - - - - - - I S T S S S S T S - - - - - - - - H H H N N H T R A S I L S T N N N
Sb000733_Sorbi1    G S P C H D A G N A S L G E L G E L D V S S I L G G L A A A A A H T S S G S P P G V L H H Q G S A A A A E S F V G A H N
 
AT2G24430.1     N P N Y S S D L L Q L P P H L Q P H P S L N I N Q S L M A N A V H L A E L S R V F R A S T S T T - - - - - - - - - M D S
Sb000733_Sorbi1    R P - - - - - - - - - - - - - - - - V D M S A Y M S W M A A A N Q G A A A A A A M L P W A T T T P P G L F G N V F A P N
 
AT2G24430.1     S H Q Q L M N Y T H M P - - - - V S G L N L N L G G A L V Q P P P V V S L E D V A A V S A S Y N G E N G - F G N V E M S
Sb000733_Sorbi1    N H Q L L Q K - - P L P F A G G C S G Q P R G L G G V V A N N V V V G S - - - - - - - - - - - - G E H A M F G S S V V K
 
AT2G24430.1     Q C M D L D - - - - - - - - - - - - - G Y W P S Y
Sb000733_Sorbi1    V G M E C D Q Q Q Q P E Q Q L G M D E S T W R T F
 
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