Input
| Putative repression domain
|
|
AT2G24500.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Sb034261 |
VATDRALALSLASSYK in 400/544 |
AT4G31420.1 |
1st_not |
0.583208395 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G24500.1 --MSGLACNSCNKDFEDDAEQKFHYKSEWHRYNLKRKIAGVPGVTEALFEARQAAIAQEK
Sb034261_Sorbi1 ARMPTVTCNACNTGFDDEEQQRLHYRSEWHRYNLKRKVAGVPGVTEALFLARQAALA-EG
*. ::**:**..*:*: :*::**:***********:*********** *****:* *
AT2G24500.1 VKAVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHVLKASTSTGEEDKA------IIKQLP
Sb034261_Sorbi1 SKPASTPMLYSCALCGKEYRSSKAHEQHLNSRSHLLKAS----QEPNASIAGITIVKPLP
*...:******.:*.* ***********:*:**:**** :* :* *:* **
AT2G24500.1 PRRVEKNNTAQLKGSIEEEESED---EWIEVDSDE-----DLDAEMNEDGEEEDMDEDGI
Sb034261_Sorbi1 ERVPRKAPSA-----VEEDEDDDEEEEWVEVDPNEMEVADESTSNMQEDEESSKSDDEMA
* .* :* :**:*.:* **:***.:* : ::*:** *... *::
AT2G24500.1 EF-ELDPACCLMCDKKHKTIEKCMVHMHKFHGFFIPDIEYLKDPKGFLTYLGLKVKRDFV
Sb034261_Sorbi1 DLEELDISSCFMCDLKHDTIEDCMVHMHKKHGFFIPDSEYLKDPSGLLTYVGLKVKRDFI
:: *** :.*:*** **.***.******* ******* ******.*:***:********:
AT2G24500.1 CLYCNELCHPFSSLEAVRKHMDAKGHCKVHYGDGGDEEDAELEEFYDYSSSYVNGDENQM
Sb034261_Sorbi1 CLYCNDRCQPFFSLEAVRKHMEAKGHCKLRYGDGGDDEDADLEDFYDYSSSYVDAEGKQL
*****: *:** *********:******::******:***:**:*********:.: :*:
AT2G24500.1 VVSGESVNTVEL-FGGSELVITKRTDNKVTSRTLGSREFMRYYKQKPAPS--SQKHIVNS
Sb034261_Sorbi1 VAVDESNNNIELGTGGSELVITNKSEKGTRVRTLGSREFIRYYRQKPRPSVATDRALALS
*. .** *.:** ********::::: . ********:***:*** ** ::: :. *
AT2G24500.1 LTSRYKMMGLATVQSKEAIVRMKVMREMNKRGAKS-SVRLGMKSNVIRNLPNNVTY
Sb034261_Sorbi1 LASSYKNMGLVTVQSKEQMVRLKVLRAMNKTGVETMRNKIGMKSNVIRNLPKNCPY
*:* ** ***.****** :**:**:* *** *.:: ::***********:* .*
BoxShade v3.31 C (beta, 970507) Output
AT2G24500.1 |
- |
- |
M |
S |
G |
L |
A |
C |
N |
S |
C |
N |
K |
D |
F |
E |
D |
D |
A |
E |
Q |
K |
F |
H |
Y |
K |
S |
E |
W |
H |
R |
Y |
N |
L |
K |
R |
K |
I |
A |
G |
V |
P |
G |
V |
T |
E |
A |
L |
F |
E |
A |
R |
Q |
A |
A |
I |
A |
Q |
E |
K |
Sb034261_Sorbi1 |
A |
R |
M |
P |
T |
V |
T |
C |
N |
A |
C |
N |
T |
G |
F |
D |
D |
E |
E |
Q |
Q |
R |
L |
H |
Y |
R |
S |
E |
W |
H |
R |
Y |
N |
L |
K |
R |
K |
V |
A |
G |
V |
P |
G |
V |
T |
E |
A |
L |
F |
L |
A |
R |
Q |
A |
A |
L |
A |
- |
E |
G |
|
AT2G24500.1 |
V |
K |
A |
V |
E |
A |
P |
M |
L |
Y |
S |
C |
G |
I |
C |
N |
K |
G |
Y |
R |
S |
S |
K |
A |
H |
E |
Q |
H |
L |
K |
S |
K |
S |
H |
V |
L |
K |
A |
S |
T |
S |
T |
G |
E |
E |
D |
K |
A |
- |
- |
- |
- |
- |
- |
I |
I |
K |
Q |
L |
P |
Sb034261_Sorbi1 |
S |
K |
P |
A |
S |
T |
P |
M |
L |
Y |
S |
C |
A |
L |
C |
G |
K |
E |
Y |
R |
S |
S |
K |
A |
H |
E |
Q |
H |
L |
N |
S |
R |
S |
H |
L |
L |
K |
A |
S |
- |
- |
- |
- |
Q |
E |
P |
N |
A |
S |
I |
A |
G |
I |
T |
I |
V |
K |
P |
L |
P |
|
AT2G24500.1 |
P |
R |
R |
V |
E |
K |
N |
N |
T |
A |
Q |
L |
K |
G |
S |
I |
E |
E |
E |
E |
S |
E |
D |
- |
- |
- |
E |
W |
I |
E |
V |
D |
S |
D |
E |
- |
- |
- |
- |
- |
D |
L |
D |
A |
E |
M |
N |
E |
D |
G |
E |
E |
E |
D |
M |
D |
E |
D |
G |
I |
Sb034261_Sorbi1 |
E |
R |
V |
P |
R |
K |
A |
P |
S |
A |
- |
- |
- |
- |
- |
V |
E |
E |
D |
E |
D |
D |
D |
E |
E |
E |
E |
W |
V |
E |
V |
D |
P |
N |
E |
M |
E |
V |
A |
D |
E |
S |
T |
S |
N |
M |
Q |
E |
D |
E |
E |
S |
S |
K |
S |
D |
D |
E |
M |
A |
|
AT2G24500.1 |
E |
F |
- |
E |
L |
D |
P |
A |
C |
C |
L |
M |
C |
D |
K |
K |
H |
K |
T |
I |
E |
K |
C |
M |
V |
H |
M |
H |
K |
F |
H |
G |
F |
F |
I |
P |
D |
I |
E |
Y |
L |
K |
D |
P |
K |
G |
F |
L |
T |
Y |
L |
G |
L |
K |
V |
K |
R |
D |
F |
V |
Sb034261_Sorbi1 |
D |
L |
E |
E |
L |
D |
I |
S |
S |
C |
F |
M |
C |
D |
L |
K |
H |
D |
T |
I |
E |
D |
C |
M |
V |
H |
M |
H |
K |
K |
H |
G |
F |
F |
I |
P |
D |
S |
E |
Y |
L |
K |
D |
P |
S |
G |
L |
L |
T |
Y |
V |
G |
L |
K |
V |
K |
R |
D |
F |
I |
|
AT2G24500.1 |
C |
L |
Y |
C |
N |
E |
L |
C |
H |
P |
F |
S |
S |
L |
E |
A |
V |
R |
K |
H |
M |
D |
A |
K |
G |
H |
C |
K |
V |
H |
Y |
G |
D |
G |
G |
D |
E |
E |
D |
A |
E |
L |
E |
E |
F |
Y |
D |
Y |
S |
S |
S |
Y |
V |
N |
G |
D |
E |
N |
Q |
M |
Sb034261_Sorbi1 |
C |
L |
Y |
C |
N |
D |
R |
C |
Q |
P |
F |
F |
S |
L |
E |
A |
V |
R |
K |
H |
M |
E |
A |
K |
G |
H |
C |
K |
L |
R |
Y |
G |
D |
G |
G |
D |
D |
E |
D |
A |
D |
L |
E |
D |
F |
Y |
D |
Y |
S |
S |
S |
Y |
V |
D |
A |
E |
G |
K |
Q |
L |
|
AT2G24500.1 |
V |
V |
S |
G |
E |
S |
V |
N |
T |
V |
E |
L |
- |
F |
G |
G |
S |
E |
L |
V |
I |
T |
K |
R |
T |
D |
N |
K |
V |
T |
S |
R |
T |
L |
G |
S |
R |
E |
F |
M |
R |
Y |
Y |
K |
Q |
K |
P |
A |
P |
S |
- |
- |
S |
Q |
K |
H |
I |
V |
N |
S |
Sb034261_Sorbi1 |
V |
A |
V |
D |
E |
S |
N |
N |
N |
I |
E |
L |
G |
T |
G |
G |
S |
E |
L |
V |
I |
T |
N |
K |
S |
E |
K |
G |
T |
R |
V |
R |
T |
L |
G |
S |
R |
E |
F |
I |
R |
Y |
Y |
R |
Q |
K |
P |
R |
P |
S |
V |
A |
T |
D |
R |
A |
L |
A |
L |
S |
|
AT2G24500.1 |
L |
T |
S |
R |
Y |
K |
M |
M |
G |
L |
A |
T |
V |
Q |
S |
K |
E |
A |
I |
V |
R |
M |
K |
V |
M |
R |
E |
M |
N |
K |
R |
G |
A |
K |
S |
- |
S |
V |
R |
L |
G |
M |
K |
S |
N |
V |
I |
R |
N |
L |
P |
N |
N |
V |
T |
Y |
Sb034261_Sorbi1 |
L |
A |
S |
S |
Y |
K |
N |
M |
G |
L |
V |
T |
V |
Q |
S |
K |
E |
Q |
M |
V |
R |
L |
K |
V |
L |
R |
A |
M |
N |
K |
T |
G |
V |
E |
T |
M |
R |
N |
K |
I |
G |
M |
K |
S |
N |
V |
I |
R |
N |
L |
P |
K |
N |
C |
P |
Y |
|
|