fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp028750 not found in 358aa AT5G24930.1 1st_not 0.414893617 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G24790.1     MASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAH
pp028750_Pp1s37 ---MPKPCDACHVSSAAVFCRADAAYLCVGCDGKVHGANKLASRHERVWMCEVCEVAPAV
                    .: **:*: ::*::*******:** .****:* ************:***** *** 

AT2G24790.1     VTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFVDEDG---
pp028750_Pp1s37 VTCKADAASLCVACDTDIHSANPLAQRHERVPVTPLFESASPLRGPDFCV-LVSENGCHD
                ********:***:** ********::******:**::::..* :... .* :*.*:*   

AT2G24790.1     -----GDVT----ASWLL----------------------------------AKEGIEI-
pp028750_Pp1s37 LLKGCEDASVVEAVSWLLPHPKISTNSIIRGSAAADEMGSSPFHDRPFSPKPKKQKVELP
                      *.:    .****                                   *: :*: 

AT2G24790.1     TNLFSDLDYPKIEVTSEENSSG--NDGVVPVQ--------NKLF--LNEDYFNFDLSASK
pp028750_Pp1s37 ADIFSDVD-PFLDL-DDATVTGIQPDSLVPVHMPECSEDTDSLAHSMDPSFTKFPLSAKS
                :::***:* * ::: .: . :*   *.:***:        :.*   :: .: :* ***..

AT2G24790.1     ISQQGFNFINQTVSTRTIDVPLVPESGGVTAEMTNTETPAVQ------------------
pp028750_Pp1s37 GYSYGTSTLTQSISCSSLDAAVVPDS-----SLSDISTPYLDSQSSQDMSARLPHQTGGP
                  . * . :.*::*  ::*..:**:*     .::: .** ::                  

AT2G24790.1     LSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSRENDGGDVG
pp028750_Pp1s37 IDTVDREARVLRYKEKRQKRKFEKTIRYASRKAYAESRPRIKGRFAKRTDSDMEQFGSVD
                :...:********:***::***************** **************  :: *.*.

AT2G24790.1     VYGGFGVVPSF
pp028750_Pp1s37 --SSFGVVPSF
                  ..*******
BoxShade v3.31 C (beta, 970507) Output
AT2G24790.1     M A S S S R L C D S C K S T A A T L F C R A D A A F L C G D C D G K I H T A N K L A S R H E R V W L C E V C E Q A P A H
pp028750_Pp1s37    - - - M P K P C D A C H V S S A A V F C R A D A A Y L C V G C D G K V H G A N K L A S R H E R V W M C E V C E V A P A V
 
AT2G24790.1     V T C K A D A A A L C V T C D R D I H S A N P L S R R H E R V P I T P F Y D A V G P A K S A S S S V N F V D E D G - - -
pp028750_Pp1s37    V T C K A D A A S L C V A C D T D I H S A N P L A Q R H E R V P V T P L F E S A S P L R G P D F C V - L V S E N G C H D
 
AT2G24790.1     - - - - - G D V T - - - - A S W L L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - A K E G I E I -
pp028750_Pp1s37    L L K G C E D A S V V E A V S W L L P H P K I S T N S I I R G S A A A D E M G S S P F H D R P F S P K P K K Q K V E L P
 
AT2G24790.1     T N L F S D L D Y P K I E V T S E E N S S G - - N D G V V P V Q - - - - - - - - N K L F - - L N E D Y F N F D L S A S K
pp028750_Pp1s37    A D I F S D V D - P F L D L - D D A T V T G I Q P D S L V P V H M P E C S E D T D S L A H S M D P S F T K F P L S A K S
 
AT2G24790.1     I S Q Q G F N F I N Q T V S T R T I D V P L V P E S G G V T A E M T N T E T P A V Q - - - - - - - - - - - - - - - - - -
pp028750_Pp1s37    G Y S Y G T S T L T Q S I S C S S L D A A V V P D S - - - - - S L S D I S T P Y L D S Q S S Q D M S A R L P H Q T G G P
 
AT2G24790.1     L S P A E R E A R V L R Y R E K R K N R K F E K T I R Y A S R K A Y A E M R P R I K G R F A K R T D S R E N D G G D V G
pp028750_Pp1s37    I D T V D R E A R V L R Y K E K R Q K R K F E K T I R Y A S R K A Y A E S R P R I K G R F A K R T D S D M E Q F G S V D
 
AT2G24790.1     V Y G G F G V V P S F
pp028750_Pp1s37    - - S S F G V V P S F
 
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