fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp025721 not found in 364aa AT5G24930.1 not_not 0.407801418 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G24790.1     MASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAH
pp025721_Pp1s97 MPKS---CDACHISSAVVYCRADAAYLCAGCDGKVHGANKLASRHERVWMCEVCEVAVAV
                *..*   **:*: ::*.::******:**..****:* ************:***** * * 

AT2G24790.1     VTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFVDEDGGDV
pp025721_Pp1s97 VTCKADAASLCVSCDTDIHSANPLAQRHERVPVQPLFDCASSAREAHISVPFPESECHET
                ********:***:** ********::******: *::*....*:.*  ** * :.:  :.

AT2G24790.1     -----------TASWL----------------------------------LAKEGIEI-T
pp025721_Pp1s97 LKGVEDSCVAEAGSWLLPHPKIPTNAIIRGSAAADEAPDSPFRARPFSPKLKKQKVDLAA
                           :.***                                  * *: ::: :

AT2G24790.1     NLFSDLDYPKIEVTSEENSSG--NDGVVPVQ---------NKLFLNEDYFNFDLSASKIS
pp025721_Pp1s97 DIFSDVD-PFLEL-DDATVTGIQPDSLVPVHIPEGSEDSPSLAHSMEPSFTTDFHLSEKS
                ::***:* * :*: .: . :*   *.:***:         .  .  *  *. *:  *: *

AT2G24790.1     QQGFNF----INQTVSTRTIDVPLVPESG-------------GVTAEMTNTETPAVQLSP
pp025721_Pp1s97 --GYSFGTSTLTHSISCSSVDAAVVPDSSLSDISTPYPLDSQG-AQELSGTRMPQQVSGP
                  *:.*    :.:::*  ::*..:**:*.             * : *::.*. *    .*

AT2G24790.1     ---AEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTDSR-ENDGGDV
pp025721_Pp1s97 IDTVDREARVMRYKEKRQKRKFEKTIRYASRKAYAESRPRIKGRFAKRTDSDVEQLFSSC
                   .:*****:**:***::***************** **************  *:  .. 

AT2G24790.1     GVYGGFGVVPSF
pp025721_Pp1s97 SMDSSFGVVPSF
                .: ..*******
BoxShade v3.31 C (beta, 970507) Output
AT2G24790.1     M A S S S R L C D S C K S T A A T L F C R A D A A F L C G D C D G K I H T A N K L A S R H E R V W L C E V C E Q A P A H
pp025721_Pp1s97    M P K S - - - C D A C H I S S A V V Y C R A D A A Y L C A G C D G K V H G A N K L A S R H E R V W M C E V C E V A V A V
 
AT2G24790.1     V T C K A D A A A L C V T C D R D I H S A N P L S R R H E R V P I T P F Y D A V G P A K S A S S S V N F V D E D G G D V
pp025721_Pp1s97    V T C K A D A A S L C V S C D T D I H S A N P L A Q R H E R V P V Q P L F D C A S S A R E A H I S V P F P E S E C H E T
 
AT2G24790.1     - - - - - - - - - - - T A S W L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L A K E G I E I - T
pp025721_Pp1s97    L K G V E D S C V A E A G S W L L P H P K I P T N A I I R G S A A A D E A P D S P F R A R P F S P K L K K Q K V D L A A
 
AT2G24790.1     N L F S D L D Y P K I E V T S E E N S S G - - N D G V V P V Q - - - - - - - - - N K L F L N E D Y F N F D L S A S K I S
pp025721_Pp1s97    D I F S D V D - P F L E L - D D A T V T G I Q P D S L V P V H I P E G S E D S P S L A H S M E P S F T T D F H L S E K S
 
AT2G24790.1     Q Q G F N F - - - - I N Q T V S T R T I D V P L V P E S G - - - - - - - - - - - - - G V T A E M T N T E T P A V Q L S P
pp025721_Pp1s97    - - G Y S F G T S T L T H S I S C S S V D A A V V P D S S L S D I S T P Y P L D S Q G - A Q E L S G T R M P Q Q V S G P
 
AT2G24790.1     - - - A E R E A R V L R Y R E K R K N R K F E K T I R Y A S R K A Y A E M R P R I K G R F A K R T D S R - E N D G G D V
pp025721_Pp1s97    I D T V D R E A R V M R Y K E K R Q K R K F E K T I R Y A S R K A Y A E S R P R I K G R F A K R T D S D V E Q L F S S C
 
AT2G24790.1     G V Y G G F G V V P S F
pp025721_Pp1s97    S M D S S F G V V P S F
 
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