fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G24790.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm009045 not found in 309aa AT5G24930.1 1st_not 0.523049645 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G24790.1     MASSSRLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPAH
gm009045_Glyma0 MA--SKLCDSCKSATATLYCRPDAAFLCGACDSKVHAANKLASRHPRVALCEVCEQAPAH
                **  *:*******::***:**.******* **.*:*:******** ** ***********

AT2G24790.1     VTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPAKSASSSVNFVDED----
gm009045_Glyma0 VTCKADAAALCLACDRDIHSANPLASRHERIPVSPFFESVHSVK-ASSPINFLDDHRFFS
                ***********::***********: ****:*::**:::* ..* ***.:**:*:.    

AT2G24790.1     --GGDVT------ASWLLAKEGIEITN---LFS--------DLDYPKIEVTSEENSSGN-
gm009045_Glyma0 DADADVSTEEAEAASWLLPNPKTDLNSSQYLFSETEPVPYIDLDYAAVDPKAEQKSSATA
                  ..**:      *****.:   ::..   ***        ****. :: .:*::**.. 

AT2G24790.1     DGVVPVQNKL--FLNEDYFNFDLSASKISQQGFNFINQTVSTRTIDVPLVPESGGVTAEM
gm009045_Glyma0 DGVVPVQSNFEPFAYGYKYNTTLSQSQMS--------QSVSSSSMEVGVVPD-GNTMSET
                *******.::  *     :*  ** *::*        *:**: :::* :**: *.. :* 

AT2G24790.1     TN---------TETPAVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIK
gm009045_Glyma0 SNCSYSKVPPVTVTVTAQFSAADREARVLRYREKRKNRKFEKTIRYASRKAYAEARPRIK
                :*         * * :.*:*.*:******************************* *****

AT2G24790.1     GRFAKRTDSRENDGGDVGVYGGFGVVPSF
gm009045_Glyma0 GRFAKRTDPDP--------LAGYGVVPSC
                ********.           .*:*****
BoxShade v3.31 C (beta, 970507) Output
AT2G24790.1     M A S S S R L C D S C K S T A A T L F C R A D A A F L C G D C D G K I H T A N K L A S R H E R V W L C E V C E Q A P A H
gm009045_Glyma0    M A - - S K L C D S C K S A T A T L Y C R P D A A F L C G A C D S K V H A A N K L A S R H P R V A L C E V C E Q A P A H
 
AT2G24790.1     V T C K A D A A A L C V T C D R D I H S A N P L S R R H E R V P I T P F Y D A V G P A K S A S S S V N F V D E D - - - -
gm009045_Glyma0    V T C K A D A A A L C L A C D R D I H S A N P L A S R H E R I P V S P F F E S V H S V K - A S S P I N F L D D H R F F S
 
AT2G24790.1     - - G G D V T - - - - - - A S W L L A K E G I E I T N - - - L F S - - - - - - - - D L D Y P K I E V T S E E N S S G N -
gm009045_Glyma0    D A D A D V S T E E A E A A S W L L P N P K T D L N S S Q Y L F S E T E P V P Y I D L D Y A A V D P K A E Q K S S A T A
 
AT2G24790.1     D G V V P V Q N K L - - F L N E D Y F N F D L S A S K I S Q Q G F N F I N Q T V S T R T I D V P L V P E S G G V T A E M
gm009045_Glyma0    D G V V P V Q S N F E P F A Y G Y K Y N T T L S Q S Q M S - - - - - - - - Q S V S S S S M E V G V V P D - G N T M S E T
 
AT2G24790.1     T N - - - - - - - - - T E T P A V Q L S P A E R E A R V L R Y R E K R K N R K F E K T I R Y A S R K A Y A E M R P R I K
gm009045_Glyma0    S N C S Y S K V P P V T V T V T A Q F S A A D R E A R V L R Y R E K R K N R K F E K T I R Y A S R K A Y A E A R P R I K
 
AT2G24790.1     G R F A K R T D S R E N D G G D V G V Y G G F G V V P S F
gm009045_Glyma0    G R F A K R T D P D P - - - - - - - - L A G Y G V V P S C
 
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