fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G25820.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005791 not found in 257aa AT5G11590.1 not_not 0.400516795 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G25820.1     MVD--------------------------------SHGSDTECSSKKKKEKTKEKG---V
pt005791_POPTR_ MSDHQQQNLETESSSTKAFSPPSPSSPSSNSNPSKKHQQDQDFSPCKKITRIRDSSKHPV
                * *                                .* .* : *. **  : ::..   *

AT2G25820.1     YRGARMRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSIKGSSAILNFPELA
pt005791_POPTR_ YRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEKAARAHDAAALSIKGNSAILNFPELA
                ***.***.************************.* ******.*******.**********

AT2G25820.1     DFLPRPVSLSQQDIQAAAAEAALMD-FKTVPFHLQDDSTPLQTRCDTEKIEKWSSSSSSA
pt005791_POPTR_ NSLPRPASLAPRDVQAAAAKAAQMDNFD----------------------QKSETTTTTT
                : ****.**: :*:*****:** ** *.                      :* .::::::

AT2G25820.1     SSSSSSSSSSSSSMLS--------GELGDIVELPSLE---NNVKYDCALYDSLEGLVSMP
pt005791_POPTR_ ASSSSSCTSSLTSLVSLMDLSSQDEELSEIVELPSLETSYDELNNDFVYSDSVYGWMYPP
                :*****.:** :*::*         **.:********   :::: * .  **: * :  *

AT2G25820.1     PWLDATENDFRYG-------DDSVLLDPCLK--ESFL-WNYE
pt005791_POPTR_ PWMQSVENICLSGGGVGENTTTTAGLISILKQAEAFKNW---
                **:::.**    *         :. * . **  *:*  *
BoxShade v3.31 C (beta, 970507) Output
AT2G25820.1     M V D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S H G S D T E C S S K K K K E K T K E K G - - - V
pt005791_POPTR_    M S D H Q Q Q N L E T E S S S T K A F S P P S P S S P S S N S N P S K K H Q Q D Q D F S P C K K I T R I R D S S K H P V
 
AT2G25820.1     Y R G A R M R S W G K W V S E I R E P R K K S R I W L G T F P T A E M A A R A H D V A A L S I K G S S A I L N F P E L A
pt005791_POPTR_    Y R G V R M R N W G K W V S E I R E P R K K S R I W L G T F P T P E K A A R A H D A A A L S I K G N S A I L N F P E L A
 
AT2G25820.1     D F L P R P V S L S Q Q D I Q A A A A E A A L M D - F K T V P F H L Q D D S T P L Q T R C D T E K I E K W S S S S S S A
pt005791_POPTR_    N S L P R P A S L A P R D V Q A A A A K A A Q M D N F D - - - - - - - - - - - - - - - - - - - - - - Q K S E T T T T T T
 
AT2G25820.1     S S S S S S S S S S S S S M L S - - - - - - - - G E L G D I V E L P S L E - - - N N V K Y D C A L Y D S L E G L V S M P
pt005791_POPTR_    A S S S S S C T S S L T S L V S L M D L S S Q D E E L S E I V E L P S L E T S Y D E L N N D F V Y S D S V Y G W M Y P P
 
AT2G25820.1     P W L D A T E N D F R Y G - - - - - - - D D S V L L D P C L K - - E S F L - W N Y E
pt005791_POPTR_    P W M Q S V E N I C L S G G G V G E N T T T T A G L I S I L K Q A E A F K N W - - -
 
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