fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G26580.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005407 not found in 188aa AT2G26580.2 1st_not 0.744807121 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G26580.1     MANSVMA--TEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSL
pt005407_POPTR_ MSSCIDAVPNEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNIWSVNMAAAFQSL
                *:..: *  .*************:***.*******************:********:***

AT2G26580.1     S-RPNFQATNYAVPEY----GSSSRSHTKIPSRI-STRTITEQRIVNRPPEKRQRVPSAY
pt005407_POPTR_ SWQDQVQASNYNSHDYRIDLGSSSKCNNKISMRTPAANIVTQERVVNRPPEKRQRVPSAY
                * : :.**:**   :*    ****:.:.**. *  ::. :*::*:***************

AT2G26580.1     NQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKIA--------
pt005407_POPTR_ NQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLETNNQTKVDDGSEKRLM
                ********************************************:*:*:*:         

AT2G26580.1     --------
pt005407_POPTR_ SRSALQNN
BoxShade v3.31 C (beta, 970507) Output
AT2G26580.1     M A N S V M A - - T E Q L C Y I P C N F C N I I L A V N V P C S S L F D I V T V R C G H C T N L W S V N M A A A L Q S L
pt005407_POPTR_    M S S C I D A V P N E Q L C Y I P C N F C N I V L A V S V P C S S L F D I V T V R C G H C T N I W S V N M A A A F Q S L
 
AT2G26580.1     S - R P N F Q A T N Y A V P E Y - - - - G S S S R S H T K I P S R I - S T R T I T E Q R I V N R P P E K R Q R V P S A Y
pt005407_POPTR_    S W Q D Q V Q A S N Y N S H D Y R I D L G S S S K C N N K I S M R T P A A N I V T Q E R V V N R P P E K R Q R V P S A Y
 
AT2G26580.1     N Q F I K E E I Q R I K A N N P D I S H R E A F S T A A K N W A H F P H I H F G L M L E S N K Q A K I A - - - - - - - -
pt005407_POPTR_    N Q F I K E E I Q R I K A N N P D I S H R E A F S T A A K N W A H F P H I H F G L M L E T N N Q T K V D D G S E K R L M
 
AT2G26580.1     - - - - - - - -
pt005407_POPTR_    S R S A L Q N N
 
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