fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G26580.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb031935 not found in 385aa AT2G26580.2 1st_not 0.534124629 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G26580.1     ---MANSVMA-TEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQ
Sb031935_Sorbi1 SEGMSSAQIAPADHVCYVHCNFCNTVLAVSVPGNSMLNIVTVRCGHCTNLLSVNLRALMH
                   *:.: :* ::::**: ***** :***.** .*:::************ ***: * ::

AT2G26580.1     SLSRPNFQATNYAVP-------------EYGSSSRSHTKIPSRISTRT---ITEQRIVN-
Sb031935_Sorbi1 SLPEQDQLQENIKVHGVNGTLHDQCGHLELGSSSSSKFRLPMMYSPQNEHLLQEQTLNNA
                **.. :    *  *              * **** *: ::*   *.:.   : ** : * 

AT2G26580.1     RPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGL------
Sb031935_Sorbi1 RPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGLNSGREG
                **************:******:************************:*:*****      

AT2G26580.1     ---MLESNKQAKIA--------
Sb031935_Sorbi1 GKKLVDEAVAAAPAPKKIQGFY
                   :::.   *  *
BoxShade v3.31 C (beta, 970507) Output
AT2G26580.1     - - - M A N S V M A - T E Q L C Y I P C N F C N I I L A V N V P C S S L F D I V T V R C G H C T N L W S V N M A A A L Q
Sb031935_Sorbi1    S E G M S S A Q I A P A D H V C Y V H C N F C N T V L A V S V P G N S M L N I V T V R C G H C T N L L S V N L R A L M H
 
AT2G26580.1     S L S R P N F Q A T N Y A V P - - - - - - - - - - - - - E Y G S S S R S H T K I P S R I S T R T - - - I T E Q R I V N -
Sb031935_Sorbi1    S L P E Q D Q L Q E N I K V H G V N G T L H D Q C G H L E L G S S S S S K F R L P M M Y S P Q N E H L L Q E Q T L N N A
 
AT2G26580.1     R P P E K R Q R V P S A Y N Q F I K E E I Q R I K A N N P D I S H R E A F S T A A K N W A H F P H I H F G L - - - - - -
Sb031935_Sorbi1    R P P E K R Q R V P S A Y N R F I K E E I R R I K A N N P D I S H R E A F S T A A K N W A H Y P N I H F G L N S G R E G
 
AT2G26580.1     - - - M L E S N K Q A K I A - - - - - - - -
Sb031935_Sorbi1    G K K L V D E A V A A A P A P K K I Q G F Y
 
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