fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G26580.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm036154 not found in 186aa AT2G26580.2 1st_not 0.774480712 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G26580.1     MANSVM--ATEQLCYIPCNFCNIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSL
gm036154_Glyma1 MSSCSIDVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSL
                *:.. :  *.*************:***.****************************:***

AT2G26580.1     SRPNFQATNYAVPEY----GSSSRSHTKIPSRISTRTITEQRIVNRPPEKRQRVPSAYNQ
gm036154_Glyma1 SWQDVQGSGHCNPEYRIDTGSTSKCNNRIAMRAPTTHVTEERVVNRPPEKRQRVPSAYNQ
                *  :.*.:.:. ***    **:*:.:.:*. * .*  :**:*:*****************

AT2G26580.1     FIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNKQAKIA----------
gm036154_Glyma1 FIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNNQVKMENVSEKHLMSR
                ********************************************:*.*:           

AT2G26580.1     ------
gm036154_Glyma1 AALLNK
BoxShade v3.31 C (beta, 970507) Output
AT2G26580.1     M A N S V M - - A T E Q L C Y I P C N F C N I I L A V N V P C S S L F D I V T V R C G H C T N L W S V N M A A A L Q S L
gm036154_Glyma1    M S S C S I D V A P E Q L C Y I P C N F C N I V L A V S V P C S S L F D I V T V R C G H C T N L W S V N M A A A F Q S L
 
AT2G26580.1     S R P N F Q A T N Y A V P E Y - - - - G S S S R S H T K I P S R I S T R T I T E Q R I V N R P P E K R Q R V P S A Y N Q
gm036154_Glyma1    S W Q D V Q G S G H C N P E Y R I D T G S T S K C N N R I A M R A P T T H V T E E R V V N R P P E K R Q R V P S A Y N Q
 
AT2G26580.1     F I K E E I Q R I K A N N P D I S H R E A F S T A A K N W A H F P H I H F G L M L E S N K Q A K I A - - - - - - - - - -
gm036154_Glyma1    F I K E E I Q R I K A N N P D I S H R E A F S T A A K N W A H F P H I H F G L M L E S N N Q V K M E N V S E K H L M S R
 
AT2G26580.1     - - - - - -
gm036154_Glyma1    A A L L N K
 
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