fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G27300.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm034078 not found in 258aa AT2G27300.1 not_1st 0.422322775 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G27300.1     ---MSKEAEMSIAVSALFPGFRFSPTDVELISYYLRRKIDGDENSVAVIAEVEIYKFEPW
gm034078_Glyma1 MEGVSREAQMSIAASSMFPGFRFCPTDEELISYYLRKKMDGHQESVQVISEVELCKYEPW
                   :*:**:****.*::******.*** ********:*:**.::** **:***: *:***

AT2G27300.1     DLPEESKLKSENEWFYFCARGRKYPHGSQSRRATQLGYWKATGKERSVKSGNQVVGTKRT
gm034078_Glyma1 DLPAKSFIQSDNEWFFFSPRGRKYPKGSQSKRATECGYWKATGKERNVKSGSNVIGTKRT
                *** :* ::*:****:*..******:****:***: **********.****.:*:*****

AT2G27300.1     LVFHIGRAPRGERTEWIMHEYCIHGAPQDALVVCRLRKNADF-------RASSTQK----
gm034078_Glyma1 LVFHLGRAPKGERTEWIMHEYCINEKSQDSLVICRLKKNTEFRLGDSSNRASSSQRHPVN
                ****:****:*************:  .**:**:***:**::*       ****:*:    

AT2G27300.1     -MEDGVVQDDGYVGQRGGLEK-EDKSYYESEHQIPNGDIAESSNVVEDQADTDDDCYAEI
gm034078_Glyma1 SHESGCAISEGGIDQRDALSSGQPKERYE------------------------EDCYAEI
                  *.* . .:* :.**..*.. : *. **                        :******

AT2G27300.1     LNDDIIKLDEEALKASQAFRPTNPTHQETISSESSSKRSKCGIKKESTETMNCYALFRIK
gm034078_Glyma1 LKDDIIKLDE-----------------SSISVED----------------------FVYK
                *:********                 .:** *.                      *  *

AT2G27300.1     NVAGTDSSWRFPNPFKIKKDDSQRLMKNVLATTVFLAILFSFFWTVLIARN
gm034078_Glyma1 LMMGSSA----PHEIRVCSGGLGRI--------------------------
                 : *:.:    *: ::: ...  *:
BoxShade v3.31 C (beta, 970507) Output
AT2G27300.1     - - - M S K E A E M S I A V S A L F P G F R F S P T D V E L I S Y Y L R R K I D G D E N S V A V I A E V E I Y K F E P W
gm034078_Glyma1    M E G V S R E A Q M S I A A S S M F P G F R F C P T D E E L I S Y Y L R K K M D G H Q E S V Q V I S E V E L C K Y E P W
 
AT2G27300.1     D L P E E S K L K S E N E W F Y F C A R G R K Y P H G S Q S R R A T Q L G Y W K A T G K E R S V K S G N Q V V G T K R T
gm034078_Glyma1    D L P A K S F I Q S D N E W F F F S P R G R K Y P K G S Q S K R A T E C G Y W K A T G K E R N V K S G S N V I G T K R T
 
AT2G27300.1     L V F H I G R A P R G E R T E W I M H E Y C I H G A P Q D A L V V C R L R K N A D F - - - - - - - R A S S T Q K - - - -
gm034078_Glyma1    L V F H L G R A P K G E R T E W I M H E Y C I N E K S Q D S L V I C R L K K N T E F R L G D S S N R A S S S Q R H P V N
 
AT2G27300.1     - M E D G V V Q D D G Y V G Q R G G L E K - E D K S Y Y E S E H Q I P N G D I A E S S N V V E D Q A D T D D D C Y A E I
gm034078_Glyma1    S H E S G C A I S E G G I D Q R D A L S S G Q P K E R Y E - - - - - - - - - - - - - - - - - - - - - - - - E D C Y A E I
 
AT2G27300.1     L N D D I I K L D E E A L K A S Q A F R P T N P T H Q E T I S S E S S S K R S K C G I K K E S T E T M N C Y A L F R I K
gm034078_Glyma1    L K D D I I K L D E - - - - - - - - - - - - - - - - - S S I S V E D - - - - - - - - - - - - - - - - - - - - - - F V Y K
 
AT2G27300.1     N V A G T D S S W R F P N P F K I K K D D S Q R L M K N V L A T T V F L A I L F S F F W T V L I A R N
gm034078_Glyma1    L M M G S S A - - - - P H E I R V C S G G L G R I - - - - - - - - - - - - - - - - - - - - - - - - - -
 
0