fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G27300.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020991 not found in 439aa AT2G27300.1 1st_1st 0.429864253 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G27300.1     MSKEAEMSIAVSALFPGFRFSPTDVELISYYLRRKIDGDENSVAVIAEVEIYKFEPWDLP
pt020991_POPTR_ ------MSIEATSMFPGFRFSPTDVELISYYLKRKIEGAEKCVEVISEIEICKHEPWDLP
                      *** .:::******************:***:* *:.* **:*:** *.******

AT2G27300.1     EESKLKSENEWFYFCARGRKYPHGSQSRRATQLGYWKATGKERSVKSGNQVVGTKRTLVF
pt020991_POPTR_ AKSVIQSENEWFFFSARGRKYPNGSQSKRATELGYWKATGKERNVNSGSDVIGTKRTLVF
                 :* ::******:*.*******:****:***:***********.*:**.:*:********

AT2G27300.1     HIGRAPRGERTEWIMHEYCIHGAPQDALVVCRLRKNADFRASSTQKMED-----------
pt020991_POPTR_ HVGRAPKGERTEWIMHEYCMKGQSQDSLVVCRLRKNAEFRLSDTSNQGDVNERHLSTTHN
                *:****:************::* .**:**********:** *.*.:  *           

AT2G27300.1     --GVVQDDGYVGQRGGLEKEDK-----------------SYYESEHQIPNG-DIAESSNV
pt020991_POPTR_ SSNAVSDGGI--DQGGVPASEKAAECSKSCESYSIEQLSSASESELKLSNDVALAESSSH
                  ..*.*.*   ::**:  .:*                 *  *** ::.*.  :****. 

AT2G27300.1     VEDQADTDDDCYAEILNDDIIKLDE---------EALKASQA---FRPTNPTHQETISSE
pt020991_POPTR_ QKD-SDNDEDFYADILKDDIIKLDETPFFAPPGLRSLVASNSGAGTRPEQPV--EIFMSE
                 :* :*.*:* **:**:********         .:* **::    ** :*.  * : **

AT2G27300.1     SSSKR--SKCGIKKESTETMNCYALFRIKNVA--GTDS----------------SWRFPN
pt020991_POPTR_ ALPLRPVPSQGTENQPVEIFMSEAL-RLSSISSQGTENQPVEIFMSEALPLSPISWQGTE
                : . *  .. * :::..* : . ** *:..::  **:.                **: .:

AT2G27300.1     PFKIKKDDSQRL-MKNVLAT-----TVFL-------AILFS-------FFWTVLIARN--
pt020991_POPTR_ NQPVEMFMSEALPLHSILGTENQPVEMFMSEALPSPSILGTENQPAEIFMSEALPSPSIS
                   ::   *: * ::.:*.*      :*:       :** :       *:  .* : .  

AT2G27300.1     -------------------------------
pt020991_POPTR_ SQGTANRRIKLRRQMPGMSQAEMHVNNVGEE
BoxShade v3.31 C (beta, 970507) Output
AT2G27300.1     M S K E A E M S I A V S A L F P G F R F S P T D V E L I S Y Y L R R K I D G D E N S V A V I A E V E I Y K F E P W D L P
pt020991_POPTR_    - - - - - - M S I E A T S M F P G F R F S P T D V E L I S Y Y L K R K I E G A E K C V E V I S E I E I C K H E P W D L P
 
AT2G27300.1     E E S K L K S E N E W F Y F C A R G R K Y P H G S Q S R R A T Q L G Y W K A T G K E R S V K S G N Q V V G T K R T L V F
pt020991_POPTR_    A K S V I Q S E N E W F F F S A R G R K Y P N G S Q S K R A T E L G Y W K A T G K E R N V N S G S D V I G T K R T L V F
 
AT2G27300.1     H I G R A P R G E R T E W I M H E Y C I H G A P Q D A L V V C R L R K N A D F R A S S T Q K M E D - - - - - - - - - - -
pt020991_POPTR_    H V G R A P K G E R T E W I M H E Y C M K G Q S Q D S L V V C R L R K N A E F R L S D T S N Q G D V N E R H L S T T H N
 
AT2G27300.1     - - G V V Q D D G Y V G Q R G G L E K E D K - - - - - - - - - - - - - - - - - S Y Y E S E H Q I P N G - D I A E S S N V
pt020991_POPTR_    S S N A V S D G G I - - D Q G G V P A S E K A A E C S K S C E S Y S I E Q L S S A S E S E L K L S N D V A L A E S S S H
 
AT2G27300.1     V E D Q A D T D D D C Y A E I L N D D I I K L D E - - - - - - - - - E A L K A S Q A - - - F R P T N P T H Q E T I S S E
pt020991_POPTR_    Q K D - S D N D E D F Y A D I L K D D I I K L D E T P F F A P P G L R S L V A S N S G A G T R P E Q P V - - E I F M S E
 
AT2G27300.1     S S S K R - - S K C G I K K E S T E T M N C Y A L F R I K N V A - - G T D S - - - - - - - - - - - - - - - - S W R F P N
pt020991_POPTR_    A L P L R P V P S Q G T E N Q P V E I F M S E A L - R L S S I S S Q G T E N Q P V E I F M S E A L P L S P I S W Q G T E
 
AT2G27300.1     P F K I K K D D S Q R L - M K N V L A T - - - - - T V F L - - - - - - - A I L F S - - - - - - - F F W T V L I A R N - -
pt020991_POPTR_    N Q P V E M F M S E A L P L H S I L G T E N Q P V E M F M S E A L P S P S I L G T E N Q P A E I F M S E A L P S P S I S
 
AT2G27300.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt020991_POPTR_    S Q G T A N R R I K L R R Q M P G M S Q A E M H V N N V G E E
 
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