fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G27470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033206 not found in 145aa AT2G27470.1 not_1st 0.508130081 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G27470.1     -MESEKVVVDELPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATAN
gm033206_Glyma1 MSEAE-----ELPRSIMRRVVKYKLSRCSEDGEISVSKDGLLAFSESGRIFIHYLSATAN
                  *:*     *** :*:***** ***.** * ::*: *:.*******.************

AT2G27470.1     DFCKDARRQTMKADDVFKALEEMDFSEFLEPLKSSLEDFKKKNAGKKAGAAAASYPAGGA
gm033206_Glyma1 DICKESKRQIINVENVFKALEETEFPEFVCPLKASLEEFRKKNARKK-------------
                *:**:::** ::.::******* :*.**: ***:***:*:**** **             

AT2G27470.1     ALKSSSGTASKPKETKKRKQEEPSTQKGARKSKIDEETKRNDEETENDNTEEENGNDEED
gm033206_Glyma1 -VVVSKGKEDEPK--KKRKLEGESSDKG--------------------------------
                 :  *.*. .:**  **** *  *::**                                

AT2G27470.1     ENGNDEEDENDDENTEENGNDEENDDENTEENGNDEENEKEDEENSMEENGNESEESGNE
gm033206_Glyma1 ------------------------------------------------------------
                                                                            

AT2G27470.1     DHSMEENGSGVGEDNENEDGSVSGSGEEVESDEEDE
gm033206_Glyma1 ------EGSEKGEDNDKGEDSDKG------------
                      :**  ****:: :.* .*
BoxShade v3.31 C (beta, 970507) Output
AT2G27470.1     - M E S E K V V V D E L P L A I V R R V V K K K L S E C S P D Y D V S I H K E A L L A F S E S A R I F I H Y L S A T A N
gm033206_Glyma1    M S E A E - - - - - E L P R S I M R R V V K Y K L S R C S E D G E I S V S K D G L L A F S E S G R I F I H Y L S A T A N
 
AT2G27470.1     D F C K D A R R Q T M K A D D V F K A L E E M D F S E F L E P L K S S L E D F K K K N A G K K A G A A A A S Y P A G G A
gm033206_Glyma1    D I C K E S K R Q I I N V E N V F K A L E E T E F P E F V C P L K A S L E E F R K K N A R K K - - - - - - - - - - - - -
 
AT2G27470.1     A L K S S S G T A S K P K E T K K R K Q E E P S T Q K G A R K S K I D E E T K R N D E E T E N D N T E E E N G N D E E D
gm033206_Glyma1    - V V V S K G K E D E P K - - K K R K L E G E S S D K G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G27470.1     E N G N D E E D E N D D E N T E E N G N D E E N D D E N T E E N G N D E E N E K E D E E N S M E E N G N E S E E S G N E
gm033206_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G27470.1     D H S M E E N G S G V G E D N E N E D G S V S G S G E E V E S D E E D E
gm033206_Glyma1    - - - - - - E G S E K G E D N D K G E D S D K G - - - - - - - - - - - -
 
0