fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G27470.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031132 not found in 161aa AT2G27470.1 1st_1st 0.544715447 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G27470.1     -MESEKVVVDELPLAIVRRVVKKKLSECSPDYDVSIHKEALLAFSESARIFIHYLSATAN
gm031132_Glyma1 MSEAE-----ELPRSIVRRVVKDKLSRCSEDGEISVSKDALLAFSESGRIFIHYLSATAN
                  *:*     *** :*******.***.** * ::*: *:********.************

AT2G27470.1     DFCKDARRQTMKADDVFKALEEMDFSEFLEPLKSSLEDFKKKNAGKKAGAAAASYPAGGA
gm031132_Glyma1 DICKESKRQIINVEDVFKALEETEFPEFLRPLKASLEEFRKKNAGKKAAV----------
                *:**:::** ::.:******** :*.***.***:***:*:********..          

AT2G27470.1     ALKSSSGTASKPKETKKRKQEEPSTQKGARKSKIDEETKRNDEETENDNTEEENGNDEED
gm031132_Glyma1 ----SKGKDDEPRKKRKLEGESPDKGEGSDKAEL------SDKGEDPDKGESDKG-----
                    *.*. .:*::.:* : *.*.. :*: *:::      .*:  : *: *.::*     

AT2G27470.1     ENGNDEEDENDDENTEENGNDEENDDENTEENGNDEENEKEDEENSMEENGNESEESGNE
gm031132_Glyma1 -------------------------------------------------------ESGDE
                                                                       ***:*

AT2G27470.1     DHSMEENGSGVGEDNENEDGSVSGSGEEVESDEEDE
gm031132_Glyma1 TNDLKE------------------------------
                 :.::*
BoxShade v3.31 C (beta, 970507) Output
AT2G27470.1     - M E S E K V V V D E L P L A I V R R V V K K K L S E C S P D Y D V S I H K E A L L A F S E S A R I F I H Y L S A T A N
gm031132_Glyma1    M S E A E - - - - - E L P R S I V R R V V K D K L S R C S E D G E I S V S K D A L L A F S E S G R I F I H Y L S A T A N
 
AT2G27470.1     D F C K D A R R Q T M K A D D V F K A L E E M D F S E F L E P L K S S L E D F K K K N A G K K A G A A A A S Y P A G G A
gm031132_Glyma1    D I C K E S K R Q I I N V E D V F K A L E E T E F P E F L R P L K A S L E E F R K K N A G K K A A V - - - - - - - - - -
 
AT2G27470.1     A L K S S S G T A S K P K E T K K R K Q E E P S T Q K G A R K S K I D E E T K R N D E E T E N D N T E E E N G N D E E D
gm031132_Glyma1    - - - - S K G K D D E P R K K R K L E G E S P D K G E G S D K A E L - - - - - - S D K G E D P D K G E S D K G - - - - -
 
AT2G27470.1     E N G N D E E D E N D D E N T E E N G N D E E N D D E N T E E N G N D E E N E K E D E E N S M E E N G N E S E E S G N E
gm031132_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - E S G D E
 
AT2G27470.1     D H S M E E N G S G V G E D N E N E D G S V S G S G E E V E S D E E D E
gm031132_Glyma1    T N D L K E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
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