fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033980 not found in 319aa AT2G28160.1 not_1st 0.419708029 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G28160.1     MEGRVNALSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPCFI-
gm033980_Glyma1 MDVHQDTLTYMNDFELYDFVADPNFDQFINLFRGE----NEDANCDHFGSDLIND-CFAN
                *: : ::*: :**:**::*:.**********:**:    :*:.  *.  . * *. **  

AT2G28160.1     DENQFIPTPVDDLFDELPDLD-------SNVAESFRSFDGDSVRAGGEEDEEDYNDGDDS
gm033980_Glyma1 NQQQLLSCPANP-FDQNNNNNAVNVYDPSSTFSSFSYYDRELKGEGGEELDEEHSSG--T
                :::*::. *.:  **:  : :       *.. .**  :* :    **** :*::..*  :

AT2G28160.1     SATTTNND-GTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDAVL
gm033980_Glyma1 MTTTTNNAVGKPKVKTDMSKTLISERRRRGRMKEKLYALRSLVPNITKMDKASIIGDAAS
                 :*****  *. *.*** *:*************:********************:***. 

AT2G28160.1     YVQELQSQAKKLKSDIAGLEASLNSTGGYQEHAPDAQKTQPFRGINPPASKKIIQMDVIQ
gm033980_Glyma1 YVHDLQARARKLKAEVAGLEASLLVSENYQGSINYPKNVQVARNIGHPICKKIMQMEMFQ
                **::**::*:***:::*******  : .**     .::.*  *.*. * .***:**:::*

AT2G28160.1     VEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDGTCFEQ
gm033980_Glyma1 VEERGYYAKIMCNKVQGLAASLYRALESLAGFNVQNSNLATVD-DSFLLTFTLNVKGTEP
                ***:*:*.:::*** :*:*.***::****:.*:******:: . *::***:**: .  * 

AT2G28160.1     SLNLPNLKLWITGSLLNQGFEFIKSFT-
gm033980_Glyma1 EINLPNLKLWVTAALLNQGFEFVASFPA
                .:********:*.:********: **.
BoxShade v3.31 C (beta, 970507) Output
AT2G28160.1     M E G R V N A L S N I N D L E L H N F L V D P N F D Q F I N L I R G D H Q T I D E N P V L D F D L G P L Q N S P C F I -
gm033980_Glyma1    M D V H Q D T L T Y M N D F E L Y D F V A D P N F D Q F I N L F R G E - - - - N E D A N C D H F G S D L I N D - C F A N
 
AT2G28160.1     D E N Q F I P T P V D D L F D E L P D L D - - - - - - - S N V A E S F R S F D G D S V R A G G E E D E E D Y N D G D D S
gm033980_Glyma1    N Q Q Q L L S C P A N P - F D Q N N N N N A V N V Y D P S S T F S S F S Y Y D R E L K G E G G E E L D E E H S S G - - T
 
AT2G28160.1     S A T T T N N D - G T R K T K T D R S R T L I S E R R R R G R M K D K L Y A L R S L V P N I T K M D K A S I V G D A V L
gm033980_Glyma1    M T T T T N N A V G K P K V K T D M S K T L I S E R R R R G R M K E K L Y A L R S L V P N I T K M D K A S I I G D A A S
 
AT2G28160.1     Y V Q E L Q S Q A K K L K S D I A G L E A S L N S T G G Y Q E H A P D A Q K T Q P F R G I N P P A S K K I I Q M D V I Q
gm033980_Glyma1    Y V H D L Q A R A R K L K A E V A G L E A S L L V S E N Y Q G S I N Y P K N V Q V A R N I G H P I C K K I M Q M E M F Q
 
AT2G28160.1     V E E K G F Y V R L V C N K G E G V A P S L Y K S L E S L T S F Q V Q N S N L S S P S P D T Y L L T Y T L D G T C F E Q
gm033980_Glyma1    V E E R G Y Y A K I M C N K V Q G L A A S L Y R A L E S L A G F N V Q N S N L A T V D - D S F L L T F T L N V K G T E P
 
AT2G28160.1     S L N L P N L K L W I T G S L L N Q G F E F I K S F T -
gm033980_Glyma1    E I N L P N L K L W V T A A L L N Q G F E F V A S F P A
 
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