fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037880 not found in 323aa AT2G28160.1 1st_1st 0.448905109 Ia
Pt022082 not found in 328aa AT2G28160.1 1st_1st 0.416058394 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G28160.1     MEGRVNALSNIND-------------LELHNFLVDPNFDQFINLIRGDHQTIDENPVLDF
pt022082_POPTR_ ----------MDDPTGNPLAAQTNFQFQLQDFIDEANFDRYIDLIRGE----NEITAFD-
gm037880_Glyma1 MDVHEDTLKYMND-------------FELYDFVADSNFDQFINLIRGE----NEDANCDH
                          ::*             ::* :*: :.***::*:****:    :* .  * 

AT2G28160.1     DLGPLQNSPCFI-DENQFIPTPVDDLFD-----ELPDLDSNVA----------ESFRSFD
pt022082_POPTR_ --CDLING--FL-VDNQFGLSTGDK-FDCDLINHVPTHTSSAM--EQDPNYVPIALPSFD
gm037880_Glyma1 FGSDLIND-CFVNNQQQPLSSPANP-FD-----QNNNNNNNDAVNVYDPSSTFSSFSCFD
                    * *.  *:  ::*   :. :  **     .     ..             :: .**

AT2G28160.1     GDSVRAGGEEDEEDYNDGDDSSATTT----NNDGTRKTKTDRSRTLISERRRRGRMKDKL
pt022082_POPTR_ GD-MGLEAEED----TDEEDSSGTATT-------TKKTKKDRSRTLISERRRRGRMKEKL
gm037880_Glyma1 GE-LKGEGEEE----NDGEHSSGTTTTTTKNADGKLKLKTDRSKTLISERRRRGRMKEKL
                *: :   .**:    .* :.**.*:*        . * *.***:*************:**

AT2G28160.1     YALRSLVPNITKMDKASIVGDAVLYVQ----------------ELQSQAKKLKSDIAGLE
pt022082_POPTR_ YALRSLVPNITKMDKASIIGDAVLYVQELQMQANKLKADIASLELQMQANKLKADIASLE
gm037880_Glyma1 YALRSLVPNITKMDKASIIGDAVSYVH----------------DLQAQARKLKAEVAGLE
                ******************:**** **:                :** **.***:::*.**

AT2G28160.1     ASLNSTGGYQEHAPDAQKTQPF-RGINPPASKKIIQMDVIQVEEKGFYVRLVCNKGEGVA
pt022082_POPTR_ SSLIGSDRYQGSNRNPKNLQN--TSNNHPIRKKIIKMDVFQVEERGFYVRLVCNKGEGVA
gm037880_Glyma1 ASLLVSENYQGSINNPKNVQVMARNISHPNCKKIMQVDMFQVEERGYLAKIVCNKGEGVA
                :**  :  **    :.:: *    . . *  ***:::*::****:*: .::*********

AT2G28160.1     PSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDGTCFEQSLNLPNLKLWITGSLLNQG
pt022082_POPTR_ PSLYRALESLTSFSVQNSNLATTS-EGFVLTFTLNVKESEQDMNLPNLKLWVTGALLNQG
gm037880_Glyma1 ASLYRALESLAGFNVQNSNLATVG-ESFLLTFTLNVKGTEQEINLPNLKLWVTGALLNQG
                .***::****:.*.******:: . : ::**:**: .  **.:********:**:*****

AT2G28160.1     FEFIKSFT-
pt022082_POPTR_ FELLTA---
gm037880_Glyma1 FEFVASFPA
                **:: :
BoxShade v3.31 C (beta, 970507) Output
AT2G28160.1     M E G R V N A L S N I N D - - - - - - - - - - - - - L E L H N F L V D P N F D Q F I N L I R G D H Q T I D E N P V L D F
pt022082_POPTR_    - - - - - - - - - - M D D P T G N P L A A Q T N F Q F Q L Q D F I D E A N F D R Y I D L I R G E - - - - N E I T A F D -
gm037880_Glyma1    M D V H E D T L K Y M N D - - - - - - - - - - - - - F E L Y D F V A D S N F D Q F I N L I R G E - - - - N E D A N C D H
 
AT2G28160.1     D L G P L Q N S P C F I - D E N Q F I P T P V D D L F D - - - - - E L P D L D S N V A - - - - - - - - - - E S F R S F D
pt022082_POPTR_    - - C D L I N G - - F L - V D N Q F G L S T G D K - F D C D L I N H V P T H T S S A M - - E Q D P N Y V P I A L P S F D
gm037880_Glyma1    F G S D L I N D - C F V N N Q Q Q P L S S P A N P - F D - - - - - Q N N N N N N N D A V N V Y D P S S T F S S F S C F D
 
AT2G28160.1     G D S V R A G G E E D E E D Y N D G D D S S A T T T - - - - N N D G T R K T K T D R S R T L I S E R R R R G R M K D K L
pt022082_POPTR_    G D - M G L E A E E D - - - - T D E E D S S G T A T T - - - - - - - T K K T K K D R S R T L I S E R R R R G R M K E K L
gm037880_Glyma1    G E - L K G E G E E E - - - - N D G E H S S G T T T T T T K N A D G K L K L K T D R S K T L I S E R R R R G R M K E K L
 
AT2G28160.1     Y A L R S L V P N I T K M D K A S I V G D A V L Y V Q - - - - - - - - - - - - - - - - E L Q S Q A K K L K S D I A G L E
pt022082_POPTR_    Y A L R S L V P N I T K M D K A S I I G D A V L Y V Q E L Q M Q A N K L K A D I A S L E L Q M Q A N K L K A D I A S L E
gm037880_Glyma1    Y A L R S L V P N I T K M D K A S I I G D A V S Y V H - - - - - - - - - - - - - - - - D L Q A Q A R K L K A E V A G L E
 
AT2G28160.1     A S L N S T G G Y Q E H A P D A Q K T Q P F - R G I N P P A S K K I I Q M D V I Q V E E K G F Y V R L V C N K G E G V A
pt022082_POPTR_    S S L I G S D R Y Q G S N R N P K N L Q N - - T S N N H P I R K K I I K M D V F Q V E E R G F Y V R L V C N K G E G V A
gm037880_Glyma1    A S L L V S E N Y Q G S I N N P K N V Q V M A R N I S H P N C K K I M Q V D M F Q V E E R G Y L A K I V C N K G E G V A
 
AT2G28160.1     P S L Y K S L E S L T S F Q V Q N S N L S S P S P D T Y L L T Y T L D G T C F E Q S L N L P N L K L W I T G S L L N Q G
pt022082_POPTR_    P S L Y R A L E S L T S F S V Q N S N L A T T S - E G F V L T F T L N V K E S E Q D M N L P N L K L W V T G A L L N Q G
gm037880_Glyma1    A S L Y R A L E S L A G F N V Q N S N L A T V G - E S F L L T F T L N V K G T E Q E I N L P N L K L W V T G A L L N Q G
 
AT2G28160.1     F E F I K S F T -
pt022082_POPTR_    F E L L T A - - -
gm037880_Glyma1    F E F V A S F P A
 
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