fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt022082 not found in 328aa AT2G28160.1 1st_1st 0.416058394 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G28160.1     ME---GRVNALSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPC
pt022082_POPTR_ MDDPTGNPLAAQTNFQFQLQDFIDEANFDRYIDLIRG------ENEITAFDCDLING---
                *:   *.  * ..  :::*::*: :.***::*:****      ** :  ** . ::.   

AT2G28160.1     FIDENQFIPTPVD----DLFDELPDLDSNVAE--------SFRSFDGDSVRAGGEEDEED
pt022082_POPTR_ FLVDNQFGLSTGDKFDCDLINHVPTHTSSAMEQDPNYVPIALPSFDGDM----GLEAEED
                *: :***  :. *    **::.:*   *.. *        :: *****     * * ***

AT2G28160.1     YNDGDDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASI
pt022082_POPTR_ -TDEEDSSGTATT---TKKTKKDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASI
                 .* :***.*:*.   *:***.*****************:********************

AT2G28160.1     VGDAVLYVQELQSQAKKLKSDIAGLE------------ASLNST-------GGYQEHAPD
pt022082_POPTR_ IGDAVLYVQELQMQANKLKADIASLELQMQANKLKADIASLESSLIGSDRYQGSNRNPKN
                :*********** **:***:***.**            ***:*:        * :.:. :

AT2G28160.1     AQKTQPFRGINPPASKKIIQMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQ
pt022082_POPTR_ LQNTSN----NHPIRKKIIKMDVFQVEERGFYVRLVCNKGEGVAPSLYRALESLTSFSVQ
                 *:*.     * *  ****:***:****:*******************::*******.**

AT2G28160.1     NSNLSSPSPDTYLLTYTLDGTCFEQSLNLPNLKLWITGSLLNQGFEFIKSFT
pt022082_POPTR_ NSNLATTS-EGFVLTFTLNVKESEQDMNLPNLKLWVTGALLNQGFELLTA--
                ****::.* : ::**:**: .  **.:********:**:*******::.:
BoxShade v3.31 C (beta, 970507) Output
AT2G28160.1     M E - - - G R V N A L S N I N D L E L H N F L V D P N F D Q F I N L I R G D H Q T I D E N P V L D F D L G P L Q N S P C
pt022082_POPTR_    M D D P T G N P L A A Q T N F Q F Q L Q D F I D E A N F D R Y I D L I R G - - - - - - E N E I T A F D C D L I N G - - -
 
AT2G28160.1     F I D E N Q F I P T P V D - - - - D L F D E L P D L D S N V A E - - - - - - - - S F R S F D G D S V R A G G E E D E E D
pt022082_POPTR_    F L V D N Q F G L S T G D K F D C D L I N H V P T H T S S A M E Q D P N Y V P I A L P S F D G D M - - - - G L E A E E D
 
AT2G28160.1     Y N D G D D S S A T T T N N D G T R K T K T D R S R T L I S E R R R R G R M K D K L Y A L R S L V P N I T K M D K A S I
pt022082_POPTR_    - T D E E D S S G T A T T - - - T K K T K K D R S R T L I S E R R R R G R M K E K L Y A L R S L V P N I T K M D K A S I
 
AT2G28160.1     V G D A V L Y V Q E L Q S Q A K K L K S D I A G L E - - - - - - - - - - - - A S L N S T - - - - - - - G G Y Q E H A P D
pt022082_POPTR_    I G D A V L Y V Q E L Q M Q A N K L K A D I A S L E L Q M Q A N K L K A D I A S L E S S L I G S D R Y Q G S N R N P K N
 
AT2G28160.1     A Q K T Q P F R G I N P P A S K K I I Q M D V I Q V E E K G F Y V R L V C N K G E G V A P S L Y K S L E S L T S F Q V Q
pt022082_POPTR_    L Q N T S N - - - - N H P I R K K I I K M D V F Q V E E R G F Y V R L V C N K G E G V A P S L Y R A L E S L T S F S V Q
 
AT2G28160.1     N S N L S S P S P D T Y L L T Y T L D G T C F E Q S L N L P N L K L W I T G S L L N Q G F E F I K S F T
pt022082_POPTR_    N S N L A T T S - E G F V L T F T L N V K E S E Q D M N L P N L K L W V T G A L L N Q G F E L L T A - -
 
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