fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037880 not found in 323aa AT2G28160.1 1st_1st 0.448905109 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G28160.1     MEGRVNALSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPCFI-
gm037880_Glyma1 MDVHEDTLKYMNDFELYDFVADSNFDQFINLIRGE----NEDANCDHFGSDLIND-CFVN
                *: : ::*. :**:**::*:.*.***********:    :*:.  *.  . * *. **: 

AT2G28160.1     DENQFIPTPVDDLFDELPDLDSNVA----------ESFRSFDGDSVRAGGEEDEEDYNDG
gm037880_Glyma1 NQQQPLSSPANP-FDQNNNNNNNDAVNVYDPSSTFSSFSCFDGE-LKGEGEEE----NDG
                :::* :.:*.:  **:  : :.* *          .** .***: ::. ***:    ***

AT2G28160.1     DDSSATTT----NNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASI
gm037880_Glyma1 EHSSGTTTTTTKNADGKLKLKTDRSKTLISERRRRGRMKEKLYALRSLVPNITKMDKASI
                :.**.***    * **. * *****:*************:********************

AT2G28160.1     VGDAVLYVQELQSQAKKLKSDIAGLEASLNSTGGYQEHAPDAQKTQPF-RGINPPASKKI
gm037880_Glyma1 IGDAVSYVHDLQAQARKLKAEVAGLEASLLVSENYQGSINNPKNVQVMARNISHPNCKKI
                :**** **::**:**:***:::*******  : .**    :.::.* : *.*. * .***

AT2G28160.1     IQMDVIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTL
gm037880_Glyma1 MQVDMFQVEERGYLAKIVCNKGEGVAASLYRALESLAGFNVQNSNLATVG-ESFLLTFTL
                :*:*::****:*: .::*********.***::****:.*:******:: . :::***:**

AT2G28160.1     DGTCFEQSLNLPNLKLWITGSLLNQGFEFIKSFT-
gm037880_Glyma1 NVKGTEQEINLPNLKLWVTGALLNQGFEFVASFPA
                : .  **.:********:**:********: **.
BoxShade v3.31 C (beta, 970507) Output
AT2G28160.1     M E G R V N A L S N I N D L E L H N F L V D P N F D Q F I N L I R G D H Q T I D E N P V L D F D L G P L Q N S P C F I -
gm037880_Glyma1    M D V H E D T L K Y M N D F E L Y D F V A D S N F D Q F I N L I R G E - - - - N E D A N C D H F G S D L I N D - C F V N
 
AT2G28160.1     D E N Q F I P T P V D D L F D E L P D L D S N V A - - - - - - - - - - E S F R S F D G D S V R A G G E E D E E D Y N D G
gm037880_Glyma1    N Q Q Q P L S S P A N P - F D Q N N N N N N N D A V N V Y D P S S T F S S F S C F D G E - L K G E G E E E - - - - N D G
 
AT2G28160.1     D D S S A T T T - - - - N N D G T R K T K T D R S R T L I S E R R R R G R M K D K L Y A L R S L V P N I T K M D K A S I
gm037880_Glyma1    E H S S G T T T T T T K N A D G K L K L K T D R S K T L I S E R R R R G R M K E K L Y A L R S L V P N I T K M D K A S I
 
AT2G28160.1     V G D A V L Y V Q E L Q S Q A K K L K S D I A G L E A S L N S T G G Y Q E H A P D A Q K T Q P F - R G I N P P A S K K I
gm037880_Glyma1    I G D A V S Y V H D L Q A Q A R K L K A E V A G L E A S L L V S E N Y Q G S I N N P K N V Q V M A R N I S H P N C K K I
 
AT2G28160.1     I Q M D V I Q V E E K G F Y V R L V C N K G E G V A P S L Y K S L E S L T S F Q V Q N S N L S S P S P D T Y L L T Y T L
gm037880_Glyma1    M Q V D M F Q V E E R G Y L A K I V C N K G E G V A A S L Y R A L E S L A G F N V Q N S N L A T V G - E S F L L T F T L
 
AT2G28160.1     D G T C F E Q S L N L P N L K L W I T G S L L N Q G F E F I K S F T -
gm037880_Glyma1    N V K G T E Q E I N L P N L K L W V T G A L L N Q G F E F V A S F P A
 
0