fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28160.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm037880 not found in 323aa AT2G28160.1 1st_1st 0.448905109 Ia
Gm033980 not found in 319aa AT2G28160.1 not_1st 0.419708029 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G28160.1     MEGRVNALSNINDLELHNFLVDPNFDQFINLIRGDHQTIDENPVLDFDLGPLQNSPCFI-
gm037880_Glyma1 MDVHEDTLKYMNDFELYDFVADSNFDQFINLIRGE----NEDANCDHFGSDLIND-CFVN
gm033980_Glyma1 MDVHQDTLTYMNDFELYDFVADPNFDQFINLFRGE----NEDANCDHFGSDLIND-CFAN
                *: : ::*. :**:**::*:.*.********:**:    :*:.  *.  . * *. **  

AT2G28160.1     DENQFIPTPVDDLFDELPDLD----------SNVAESFRSFDGDSVRAGGEEDEEDYNDG
gm037880_Glyma1 NQQQPLSSPANP-FDQNNNNNNNDAVNVYDPSSTFSSFSCFDGELKGEGEEENDGEHSSG
gm033980_Glyma1 NQQQLLSCPANP-FDQNNNNN---AVNVYDPSSTFSSFSYYDRELKGEGGEELDEEHSSG
                :::* :. *.:  **:  : :          *.. .**  :* :    * ** : ::..*

AT2G28160.1     DDSSATTTNNDGTRKTKTDRSRTLISERRRRGRMKDKLYALRSLVPNITKMDKASIVGDA
gm037880_Glyma1 -TTTTTTKNADGKLKLKTDRSKTLISERRRRGRMKEKLYALRSLVPNITKMDKASIIGDA
gm033980_Glyma1 -TMTTTTNNAVGKPKVKTDMSKTLISERRRRGRMKEKLYALRSLVPNITKMDKASIIGDA
                   ::**.*  *. * *** *:*************:********************:***

AT2G28160.1     VLYVQELQSQAKKLKSDIAGLEASLNSTGGYQEHAPDAQKTQP-FRGINPPASKKIIQMD
gm037880_Glyma1 VSYVHDLQAQARKLKAEVAGLEASLLVSENYQGSINNPKNVQVMARNISHPNCKKIMQVD
gm033980_Glyma1 ASYVHDLQARARKLKAEVAGLEASLLVSENYQGSINYPKNVQV-ARNIGHPICKKIMQME
                . **::**::*:***:::*******  : .**     .::.*   *.*. * .***:*::

AT2G28160.1     VIQVEEKGFYVRLVCNKGEGVAPSLYKSLESLTSFQVQNSNLSSPSPDTYLLTYTLDGTC
gm037880_Glyma1 MFQVEERGYLAKIVCNKGEGVAASLYRALESLAGFNVQNSNLATVG-ESFLLTFTLNVKG
gm033980_Glyma1 MFQVEERGYYAKIMCNKVQGLAASLYRALESLAGFNVQNSNLATVD-DSFLLTFTLNVKG
                ::****:*: .:::*** :*:*.***::****:.*:******:: . :::***:**: . 

AT2G28160.1     FEQSLNLPNLKLWITGSLLNQGFEFIKSFT-
gm037880_Glyma1 TEQEINLPNLKLWVTGALLNQGFEFVASFPA
gm033980_Glyma1 TEPEINLPNLKLWVTAALLNQGFEFVASFPA
                 * .:********:*.:********: **.
BoxShade v3.31 C (beta, 970507) Output
AT2G28160.1     M E G R V N A L S N I N D L E L H N F L V D P N F D Q F I N L I R G D H Q T I D E N P V L D F D L G P L Q N S P C F I -
gm037880_Glyma1    M D V H E D T L K Y M N D F E L Y D F V A D S N F D Q F I N L I R G E - - - - N E D A N C D H F G S D L I N D - C F V N
gm033980_Glyma1    M D V H Q D T L T Y M N D F E L Y D F V A D P N F D Q F I N L F R G E - - - - N E D A N C D H F G S D L I N D - C F A N
 
AT2G28160.1     D E N Q F I P T P V D D L F D E L P D L D - - - - - - - - - - S N V A E S F R S F D G D S V R A G G E E D E E D Y N D G
gm037880_Glyma1    N Q Q Q P L S S P A N P - F D Q N N N N N N N D A V N V Y D P S S T F S S F S C F D G E L K G E G E E E N D G E H S S G
gm033980_Glyma1    N Q Q Q L L S C P A N P - F D Q N N N N N - - - A V N V Y D P S S T F S S F S Y Y D R E L K G E G G E E L D E E H S S G
 
AT2G28160.1     D D S S A T T T N N D G T R K T K T D R S R T L I S E R R R R G R M K D K L Y A L R S L V P N I T K M D K A S I V G D A
gm037880_Glyma1    - T T T T T T K N A D G K L K L K T D R S K T L I S E R R R R G R M K E K L Y A L R S L V P N I T K M D K A S I I G D A
gm033980_Glyma1    - T M T T T T N N A V G K P K V K T D M S K T L I S E R R R R G R M K E K L Y A L R S L V P N I T K M D K A S I I G D A
 
AT2G28160.1     V L Y V Q E L Q S Q A K K L K S D I A G L E A S L N S T G G Y Q E H A P D A Q K T Q P - F R G I N P P A S K K I I Q M D
gm037880_Glyma1    V S Y V H D L Q A Q A R K L K A E V A G L E A S L L V S E N Y Q G S I N N P K N V Q V M A R N I S H P N C K K I M Q V D
gm033980_Glyma1    A S Y V H D L Q A R A R K L K A E V A G L E A S L L V S E N Y Q G S I N Y P K N V Q V - A R N I G H P I C K K I M Q M E
 
AT2G28160.1     V I Q V E E K G F Y V R L V C N K G E G V A P S L Y K S L E S L T S F Q V Q N S N L S S P S P D T Y L L T Y T L D G T C
gm037880_Glyma1    M F Q V E E R G Y L A K I V C N K G E G V A A S L Y R A L E S L A G F N V Q N S N L A T V G - E S F L L T F T L N V K G
gm033980_Glyma1    M F Q V E E R G Y Y A K I M C N K V Q G L A A S L Y R A L E S L A G F N V Q N S N L A T V D - D S F L L T F T L N V K G
 
AT2G28160.1     F E Q S L N L P N L K L W I T G S L L N Q G F E F I K S F T -
gm037880_Glyma1    T E Q E I N L P N L K L W V T G A L L N Q G F E F V A S F P A
gm033980_Glyma1    T E P E I N L P N L K L W V T A A L L N Q G F E F V A S F P A
 
0