fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28550.1 MLDLNLNADSP at 0/449 in AT2G28550.1
MLDLNLNADSP at 0/381 in AT2G28550.2
MLDLNLNADSP at 0/464 in AT2G28550.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033047 MLDLNLNAEWT in 1/477 AT2G28550.1 not_1st 0.459697732 II
EGGGQNLDLNLGIATP in 311/477
Gm030967 MLDLNLNAEWT in 1/372 AT2G28550.1 not_1st 0.401763224 II
EGGSQNLDLNLGIATP in 330/372
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G28550.1     MLDLNLNADSPESTQYGGDSYLDRQTSDNSAGNRVEESGTSTSSVINAD------GDEDS
gm030967_Glyma1 MLDLNLNAEWTDSFS-NGESPLPLEKFPDGLRNQMAESGTSNSSVVNADGSSNGGGDEDS
gm033047_Glyma1 MLDLNLNAEWTDSFS-NGDSPLPSQKFPEGSRNQMAESGTSNSSVVNADGSSNGGGDEDS
                ********: .:* . .*:* *  :.  :.  *:: *****.***:***      *****

AT2G28550.1     CSTR-----AFTLSFDILKVGSSSGGDESPAASASVTKEFFPV--SGDCGHLRDVEGSSS
gm030967_Glyma1 DSTRAADDVYTTFNFDILKV---------EGANGFVTKELFPVMSEGAKGH---ATSSFS
gm033047_Glyma1 CSTR-ADDVYTTFNFDILKV---------EGANDVVTKELFPVMSEGAKGH---ATSSFS
                 ***       *:.******          .*.  ****:***  .*  **   . .* *

AT2G28550.1     SRN-WIDLSFDRIGD--GETKLVTPVP-------TPAPVPAQVKKSRRGPRSRSSQYRGV
gm030967_Glyma1 GTNGFVDLSFDGDGGNTSEMKMLQPQNQNQTQTRTQTQQPA--KKSRRGPRSRSSQYRGV
gm033047_Glyma1 ARNGFVDLSFDREGGD-SEMKMLQPQNQPQTQ--TQTQQPA--KKSRRGPRSRSSQYRGV
                . * ::*****  *.  .* *:: *         * :  **  *****************

AT2G28550.1     TFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFTLGDYEEDM
gm030967_Glyma1 TFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEDDL
gm033047_Glyma1 TFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEDDL
                ***************************************************.*.***:*:

AT2G28550.1     KQVQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK---------
gm030967_Glyma1 KQMQNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKYIYLGLFDS
gm033047_Glyma1 KQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKK---------
                **::***********************************************         

AT2G28550.1     ------AYDKAAINTNGREAVTNFEMSSYQNEINS----ESNNSEIDLNLGISLSTGNAP
gm030967_Glyma1 EVEAARAYDKAAIKCNGREAVTNFEPSTYEGELKSAAINEGGSQNLDLNLGIA-TPGP-P
gm033047_Glyma1 ------AYDKAAIKCNGREAVTNFEPSTYEGEMKSAAINEGGGQNLDLNLGIA-TPGPGP
                      *******: ********** *:*:.*::*    *....::******: :.*  *

AT2G28550.1     KQNGRLFHFPSNTYETQRGVSLRIDNEYM---GKPVNTPLPYGSSDHRLYWNGACPSYNN
gm030967_Glyma1 KENWGQLQFPSFPYNTHGGRSSMMETNVS-------------------------------
gm033047_Glyma1 KENWGQLHFPSIPYNTHGGRSSKMETNVNSGIGNPSLKRMVV-TEDRPSLWNGMSPNFFP
                *:*   ::*** .*:*: * *  ::.:                                 

AT2G28550.1     PAEGRATEKRSEAEGM-----MSNWGWQRPGQTSAVRPQPPGPQPPPLFSVAAASSGFS-
gm030967_Glyma1 ------------------------------------------------------------
gm033047_Glyma1 NGE------RAERIGIDPSKGLPNWAWQTHGQVNAT--------PVPSFS-AAASSGFSI
                                                                            

AT2G28550.1     ---------------HFRPQ--------PPNDNATRGYFYPHP-----
gm030967_Glyma1 ------------------------------------------------
gm033047_Glyma1 SATFPSTAIFPTSSMNSIPQSLCFTSSSSPTRNVSEYYYQVKPPQAPP
BoxShade v3.31 C (beta, 970507) Output
AT2G28550.1     M L D L N L N A D S P E S T Q Y G G D S Y L D R Q T S D N S A G N R V E E S G T S T S S V I N A D - - - - - - G D E D S
gm030967_Glyma1    M L D L N L N A E W T D S F S - N G E S P L P L E K F P D G L R N Q M A E S G T S N S S V V N A D G S S N G G G D E D S
gm033047_Glyma1    M L D L N L N A E W T D S F S - N G D S P L P S Q K F P E G S R N Q M A E S G T S N S S V V N A D G S S N G G G D E D S
 
AT2G28550.1     C S T R - - - - - A F T L S F D I L K V G S S S G G D E S P A A S A S V T K E F F P V - - S G D C G H L R D V E G S S S
gm030967_Glyma1    D S T R A A D D V Y T T F N F D I L K V - - - - - - - - - E G A N G F V T K E L F P V M S E G A K G H - - - A T S S F S
gm033047_Glyma1    C S T R - A D D V Y T T F N F D I L K V - - - - - - - - - E G A N D V V T K E L F P V M S E G A K G H - - - A T S S F S
 
AT2G28550.1     S R N - W I D L S F D R I G D - - G E T K L V T P V P - - - - - - - T P A P V P A Q V K K S R R G P R S R S S Q Y R G V
gm030967_Glyma1    G T N G F V D L S F D G D G G N T S E M K M L Q P Q N Q N Q T Q T R T Q T Q Q P A - - K K S R R G P R S R S S Q Y R G V
gm033047_Glyma1    A R N G F V D L S F D R E G G D - S E M K M L Q P Q N Q P Q T Q - - T Q T Q Q P A - - K K S R R G P R S R S S Q Y R G V
 
AT2G28550.1     T F Y R R T G R W E S H I W D C G K Q V Y L G G F D T A H A A A R A Y D R A A I K F R G V D A D I N F T L G D Y E E D M
gm030967_Glyma1    T F Y R R T G R W E S H I W D C G K Q V Y L G G F D T A H A A A R A Y D R A A I K F R G V D A D I N F N L S D Y E D D L
gm033047_Glyma1    T F Y R R T G R W E S H I W D C G K Q V Y L G G F D T A H A A A R A Y D R A A I K F R G V D A D I N F N L S D Y E D D L
 
AT2G28550.1     K Q V Q N L S K E E F V H I L R R Q S T G F S R G S S K Y R G V T L H K C G R W E A R M G Q F L G K K - - - - - - - - -
gm030967_Glyma1    K Q M Q N L S K E E F V H I L R R Q S T G F S R G S S K Y R G V T L H K C G R W E A R M G Q F L G K K Y I Y L G L F D S
gm033047_Glyma1    K Q M K N L S K E E F V H I L R R Q S T G F S R G S S K Y R G V T L H K C G R W E A R M G Q F L G K K - - - - - - - - -
 
AT2G28550.1     - - - - - - A Y D K A A I N T N G R E A V T N F E M S S Y Q N E I N S - - - - E S N N S E I D L N L G I S L S T G N A P
gm030967_Glyma1    E V E A A R A Y D K A A I K C N G R E A V T N F E P S T Y E G E L K S A A I N E G G S Q N L D L N L G I A - T P G P - P
gm033047_Glyma1    - - - - - - A Y D K A A I K C N G R E A V T N F E P S T Y E G E M K S A A I N E G G G Q N L D L N L G I A - T P G P G P
 
AT2G28550.1     K Q N G R L F H F P S N T Y E T Q R G V S L R I D N E Y M - - - G K P V N T P L P Y G S S D H R L Y W N G A C P S Y N N
gm030967_Glyma1    K E N W G Q L Q F P S F P Y N T H G G R S S M M E T N V S - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm033047_Glyma1    K E N W G Q L H F P S I P Y N T H G G R S S K M E T N V N S G I G N P S L K R M V V - T E D R P S L W N G M S P N F F P
 
AT2G28550.1     P A E G R A T E K R S E A E G M - - - - - M S N W G W Q R P G Q T S A V R P Q P P G P Q P P P L F S V A A A S S G F S -
gm030967_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm033047_Glyma1    N G E - - - - - - R A E R I G I D P S K G L P N W A W Q T H G Q V N A T - - - - - - - - P V P S F S - A A A S S G F S I
 
AT2G28550.1     - - - - - - - - - - - - - - - H F R P Q - - - - - - - - P P N D N A T R G Y F Y P H P - - - - -
gm030967_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
gm033047_Glyma1    S A T F P S T A I F P T S S M N S I P Q S L C F T S S S S P T R N V S E Y Y Y Q V K P P Q A P P
 
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