fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28550.1 MLDLNLNADSP at 0/449 in AT2G28550.1
MLDLNLNADSP at 0/381 in AT2G28550.2
MLDLNLNADSP at 0/464 in AT2G28550.3
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm033046 MLDLNLNAEWT in 1/478 AT2G28550.1 1st_1st 0.463476070 Ia
EGGGQNLDLNLGIATP in 311/478
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G28550.1     MLDLNLNADSPESTQYGGDSYLDRQTSDNSAGNRVEESGTSTSSVINAD------GDEDS
gm033046_Glyma1 MLDLNLNAEWTDSFS-NGDSPLPSQKFPEGSRNQMAESGTSNSSVVNADGSSNGGGDEDS
                ********: .:* . .*** *  *.  :.: *:: *****.***:***      *****

AT2G28550.1     CSTRA----FTLSFDILKVGSSSGGDESPAASASVTKEFFPV--SGDCGHLRDVEGSSSS
gm033046_Glyma1 CSTRADDVYTTFNFDILKV---------EGANDVVTKELFPVMSEGAKGH---ATSSFSA
                *****     *:.******          .*.  ****:***  .*  **   . .* *:

AT2G28550.1     RN-WIDLSFDRI-GDGETKLVTPVPTP-----APVPAQVKKSRRGPRSRSSQYRGVTFYR
gm033046_Glyma1 RNGFVDLSFDREGGDSEMKMLQPQNQPQTQTQTQQPA--KKSRRGPRSRSSQYRGVTFYR
                ** ::******  **.* *:: *   *     :  **  *********************

AT2G28550.1     RTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFTLGDYEEDMKQVQ
gm033046_Glyma1 RTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEDDLKQMK
                ***********************************************.*.***:*:**::

AT2G28550.1     NLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAINTNGRE
gm033046_Glyma1 NLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGRE
                ******************************************************: ****

AT2G28550.1     AVTNFEMSSYQNEINS----ESNNSEIDLNLGISLSTGNAPKQNGRLFHFPSNTYETQRG
gm033046_Glyma1 AVTNFEPSTYEGEMKSAAINEGGGQNLDLNLGIA-TPGPGPKENWGQLHFPSIPYNTHGG
                ****** *:*:.*::*    *....::******: :.* .**:*   :**** .*:*: *

AT2G28550.1     VSLRID---NEYMGKPVNTPLPYGSSDHRLYWNGACPSYNNPAEGRATEKRSEAEGMMSN
gm033046_Glyma1 RSSKMETNVNSGIGNPSLKRMVV-TEDRPSLWNGMSPNFFPNGQERAERIGIDPSKGLPN
                 * :::   *. :*:*  . :   :.*:   *** .*.:   .: ** .   :..  :.*

AT2G28550.1     WGWQRPGQTSAVRPQPPGPQPPPLFSVAAASSGFS----------------HFRPQ----
gm033046_Glyma1 WAWQTHGQVNAT--------PVPSFS-AAASSGFSISATFPSTAIFPTSSMNSIPQSLCF
                *.**  **..*.        * * ** ********                :  **    

AT2G28550.1     ----PPNDNATRGYFYPHP-----
gm033046_Glyma1 TSSSSPTRNVSEYYYQVKPPQAPP
                    .*. *.:. *:  :*
BoxShade v3.31 C (beta, 970507) Output
AT2G28550.1     M L D L N L N A D S P E S T Q Y G G D S Y L D R Q T S D N S A G N R V E E S G T S T S S V I N A D - - - - - - G D E D S
gm033046_Glyma1    M L D L N L N A E W T D S F S - N G D S P L P S Q K F P E G S R N Q M A E S G T S N S S V V N A D G S S N G G G D E D S
 
AT2G28550.1     C S T R A - - - - F T L S F D I L K V G S S S G G D E S P A A S A S V T K E F F P V - - S G D C G H L R D V E G S S S S
gm033046_Glyma1    C S T R A D D V Y T T F N F D I L K V - - - - - - - - - E G A N D V V T K E L F P V M S E G A K G H - - - A T S S F S A
 
AT2G28550.1     R N - W I D L S F D R I - G D G E T K L V T P V P T P - - - - - A P V P A Q V K K S R R G P R S R S S Q Y R G V T F Y R
gm033046_Glyma1    R N G F V D L S F D R E G G D S E M K M L Q P Q N Q P Q T Q T Q T Q Q P A - - K K S R R G P R S R S S Q Y R G V T F Y R
 
AT2G28550.1     R T G R W E S H I W D C G K Q V Y L G G F D T A H A A A R A Y D R A A I K F R G V D A D I N F T L G D Y E E D M K Q V Q
gm033046_Glyma1    R T G R W E S H I W D C G K Q V Y L G G F D T A H A A A R A Y D R A A I K F R G V D A D I N F N L S D Y E D D L K Q M K
 
AT2G28550.1     N L S K E E F V H I L R R Q S T G F S R G S S K Y R G V T L H K C G R W E A R M G Q F L G K K A Y D K A A I N T N G R E
gm033046_Glyma1    N L S K E E F V H I L R R Q S T G F S R G S S K Y R G V T L H K C G R W E A R M G Q F L G K K A Y D K A A I K C N G R E
 
AT2G28550.1     A V T N F E M S S Y Q N E I N S - - - - E S N N S E I D L N L G I S L S T G N A P K Q N G R L F H F P S N T Y E T Q R G
gm033046_Glyma1    A V T N F E P S T Y E G E M K S A A I N E G G G Q N L D L N L G I A - T P G P G P K E N W G Q L H F P S I P Y N T H G G
 
AT2G28550.1     V S L R I D - - - N E Y M G K P V N T P L P Y G S S D H R L Y W N G A C P S Y N N P A E G R A T E K R S E A E G M M S N
gm033046_Glyma1    R S S K M E T N V N S G I G N P S L K R M V V - T E D R P S L W N G M S P N F F P N G Q E R A E R I G I D P S K G L P N
 
AT2G28550.1     W G W Q R P G Q T S A V R P Q P P G P Q P P P L F S V A A A S S G F S - - - - - - - - - - - - - - - - H F R P Q - - - -
gm033046_Glyma1    W A W Q T H G Q V N A T - - - - - - - - P V P S F S - A A A S S G F S I S A T F P S T A I F P T S S M N S I P Q S L C F
 
AT2G28550.1     - - - - P P N D N A T R G Y F Y P H P - - - - -
gm033046_Glyma1    T S S S S P T R N V S E Y Y Y Q V K P P Q A P P
 
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