fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28610.1 HQQQHQLQLQLQQIKP at 81/244 in AT2G28610.1
KIPLKTLELFPISSIN at 225/244 in AT2G28610.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os039714 CRPLKTLELFPTKSTS in 172/234 AT2G28610.1 1st_1st 0.402597402 Ia
Sb011646 RRPLKTLDLFPTKSTG in 232/260 AT2G28610.1 1st_1st 0.402597402 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G28610.1     MSPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNH
Sb011646_Sorbi1 MPQTPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNH
Os039714_Os12t0 MPQTPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNH
                *. ..*********************:*****.:*********:****************

AT2G28610.1     KARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQP----------VNKNIIDH
Sb011646_Sorbi1 KARERQRLRRRLCAR-HQQQYAQQQQQQATAAAPSSS--PLPSPAAGGSSAGVHPAVMQL
Os039714_Os12t0 KARERQRLRRRLCAR-HQQQ----------PSPPSSTVPPAPTAAAAGAVVQVHPAVMQL
                ***:**:**::*. : ****           . * *:  . *          *:  ::: 

AT2G28610.1     HNPYHHHHHNHHHNHHRPY--------DHMSFDCCSHPSPMCLP----------------
Sb011646_Sorbi1 ------------HQHHHPYATNFVPHLGYLGQQAATVP-PVLNPAAAGMVDLAAAGAGAG
Os039714_Os12t0 H---------HHHHHHHPYAAAAAAQSHHLQQQ---------------------------
                            *:**:**         ::  :                           

AT2G28610.1     HQGTGVGEA--------------------PSKVMNEYYCTKSGAEEILMQKSITGPNSSY
Sb011646_Sorbi1 NKATGAGGGYGGGAALYNSCSSNQLEEWDPAEAME--HCNASCG------------AASG
Os039714_Os12t0 ---------------------QQQQAEW-PA-AVD--YCSTASA------------SASA
                                             *: .::  :*. : .             :* 

AT2G28610.1     GRDWMMMMDMGPRPSYPSSSSSPISCCNMMMSSPKIPLKTLELFPISSI--NSKQDSTKL
Sb011646_Sorbi1 SSDEGGAAHLQLPP-----------CC-------RRPLKTLDLFPTKST--GLKDECSSS
Os039714_Os12t0 T-----AADMAIPP-----------CC--------RPLKTLELFPTKSTSGGLKEDCCSS
                        .:   *           **         *****:*** .*   . *::. . 

AT2G28610.1     ------------------------------------------
Sb011646_Sorbi1 ----------------KSSSCSTSTN----------------
Os039714_Os12t0 SKPWARSVVESLGGRERSSLAVVDSGGDMDGIERRRRELGER
BoxShade v3.31 C (beta, 970507) Output
AT2G28610.1     M S P V A S T R W C P T P E Q L M I L E E M Y R S G I R T P N A V Q I Q Q I T A H L A F Y G R I E G K N V F Y W F Q N H
Sb011646_Sorbi1    M P Q T P S T R W C P T P E Q L M I L E E M Y R S G V R T P N A A E I Q Q I T A H L A Y Y G R I E G K N V F Y W F Q N H
Os039714_Os12t0    M P Q T P S T R W C P T P E Q L M I L E E M Y R S G V R T P N A A E I Q Q I T A H L A Y Y G R I E G K N V F Y W F Q N H
 
AT2G28610.1     K A R D R Q K L R K K L A K Q L H Q Q Q H Q L Q L Q L Q Q I K P K P I S S M I S Q P - - - - - - - - - - V N K N I I D H
Sb011646_Sorbi1    K A R E R Q R L R R R L C A R - H Q Q Q Y A Q Q Q Q Q Q A T A A A P S S S - - P L P S P A A G G S S A G V H P A V M Q L
Os039714_Os12t0    K A R E R Q R L R R R L C A R - H Q Q Q - - - - - - - - - - P S P P S S T V P P A P T A A A A G A V V Q V H P A V M Q L
 
AT2G28610.1     H N P Y H H H H H N H H H N H H R P Y - - - - - - - - D H M S F D C C S H P S P M C L P - - - - - - - - - - - - - - - -
Sb011646_Sorbi1    - - - - - - - - - - - - H Q H H H P Y A T N F V P H L G Y L G Q Q A A T V P - P V L N P A A A G M V D L A A A G A G A G
Os039714_Os12t0    H - - - - - - - - - H H H H H H H P Y A A A A A A Q S H H L Q Q Q - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G28610.1     H Q G T G V G E A - - - - - - - - - - - - - - - - - - - - P S K V M N E Y Y C T K S G A E E I L M Q K S I T G P N S S Y
Sb011646_Sorbi1    N K A T G A G G G Y G G G A A L Y N S C S S N Q L E E W D P A E A M E - - H C N A S C G - - - - - - - - - - - - A A S G
Os039714_Os12t0    - - - - - - - - - - - - - - - - - - - - - Q Q Q Q A E W - P A - A V D - - Y C S T A S A - - - - - - - - - - - - S A S A
 
AT2G28610.1     G R D W M M M M D M G P R P S Y P S S S S S P I S C C N M M M S S P K I P L K T L E L F P I S S I - - N S K Q D S T K L
Sb011646_Sorbi1    S S D E G G A A H L Q L P P - - - - - - - - - - - C C - - - - - - - R R P L K T L D L F P T K S T - - G L K D E C S S S
Os039714_Os12t0    T - - - - - A A D M A I P P - - - - - - - - - - - C C - - - - - - - - R P L K T L E L F P T K S T S G G L K E D C C S S
 
AT2G28610.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb011646_Sorbi1    - - - - - - - - - - - - - - - - K S S S C S T S T N - - - - - - - - - - - - - - - -
Os039714_Os12t0    S K P W A R S V V E S L G G R E R S S L A V V D S G G D M D G I E R R R R E L G E R
 
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