fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28610.1 HQQQHQLQLQLQQIKP at 81/244 in AT2G28610.1
KIPLKTLELFPISSIN at 225/244 in AT2G28610.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os039714 CRPLKTLELFPTKSTS in 172/234 AT2G28610.1 1st_1st 0.402597402 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G28610.1     MSPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNH
Os039714_Os12t0 MPQTPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNH
                *. ..*********************:*****.:*********:****************

AT2G28610.1     KARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMI----SQPVNKNIIDHHNPYHH
Os039714_Os12t0 KARERQRLRRRLCAR-HQQQ-----------PSPPSSTVPPAPTAAAAGAVVQVHPAVMQ
                ***:**:**::*. : ****           *.* ** :    : ..   ::: * .  :

AT2G28610.1     HHHNHHHNHHRPYDHMSFDCCSHPSPMCLPHQGTGVGEAPSKVMNEYYCTKSGAEEILMQ
Os039714_Os12t0 LHHHHHHHH--PYAAAAAAQSHH-----LQQQQQQQAEWPAAV---DYCSTASA-----S
                 **:***:*  **   :   . *     * :*    .* *: *    **:.:.*     .

AT2G28610.1     KSITGPNSSYGRDWMMMMDMGPRPSYPSSSSSPISCCNMMMSSPKIPLKTLELFPISSIN
Os039714_Os12t0 ASATAA------------DMAIPP-----------CCR--------PLKTLELFPTKSTS
                 * *..            **.  *           **.        ********* .* .

AT2G28610.1     S--KQD---STKL---------------------------------------
Os039714_Os12t0 GGLKEDCCSSSKPWARSVVESLGGRERSSLAVVDSGGDMDGIERRRRELGER
                .  *:*   *:*
BoxShade v3.31 C (beta, 970507) Output
AT2G28610.1     M S P V A S T R W C P T P E Q L M I L E E M Y R S G I R T P N A V Q I Q Q I T A H L A F Y G R I E G K N V F Y W F Q N H
Os039714_Os12t0    M P Q T P S T R W C P T P E Q L M I L E E M Y R S G V R T P N A A E I Q Q I T A H L A Y Y G R I E G K N V F Y W F Q N H
 
AT2G28610.1     K A R D R Q K L R K K L A K Q L H Q Q Q H Q L Q L Q L Q Q I K P K P I S S M I - - - - S Q P V N K N I I D H H N P Y H H
Os039714_Os12t0    K A R E R Q R L R R R L C A R - H Q Q Q - - - - - - - - - - - P S P P S S T V P P A P T A A A A G A V V Q V H P A V M Q
 
AT2G28610.1     H H H N H H H N H H R P Y D H M S F D C C S H P S P M C L P H Q G T G V G E A P S K V M N E Y Y C T K S G A E E I L M Q
Os039714_Os12t0    L H H H H H H H H - - P Y A A A A A A Q S H H - - - - - L Q Q Q Q Q Q Q A E W P A A V - - - D Y C S T A S A - - - - - S
 
AT2G28610.1     K S I T G P N S S Y G R D W M M M M D M G P R P S Y P S S S S S P I S C C N M M M S S P K I P L K T L E L F P I S S I N
Os039714_Os12t0    A S A T A A - - - - - - - - - - - - D M A I P P - - - - - - - - - - - C C R - - - - - - - - P L K T L E L F P T K S T S
 
AT2G28610.1     S - - K Q D - - - S T K L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os039714_Os12t0    G G L K E D C C S S S K P W A R S V V E S L G G R E R S S L A V V D S G G D M D G I E R R R R E L G E R
 
0