fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28610.1 HQQQHQLQLQLQQIKP at 81/244 in AT2G28610.1
KIPLKTLELFPISSIN at 225/244 in AT2G28610.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb011646 RRPLKTLDLFPTKSTG in 232/260 AT2G28610.1 1st_1st 0.402597402 Ia
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G28610.1     MSPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNH
Sb011646_Sorbi1 MPQTPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNH
                *. ..*********************:*****.:*********:****************

AT2G28610.1     KARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHHHHHN
Sb011646_Sorbi1 KARERQRLRRRLCAR-HQQQYAQQQQQQATAAAPSSSPLPSPAAGGSSAGVHPAVMQLHQ
                ***:**:**::*. : ****:  * * *   . * ** :..*.  .     :*   : *:

AT2G28610.1     HHHNHHRPYDHMSFDCCSHPSPMCLPHQGTGVGEAPSKV----------MNEYYCTKSGA
Sb011646_Sorbi1 HHH----PY-----------ATNFVPHLGY-LGQQAATVPPVLNPAAAGMVDLAAAGAGA
                ***    **           :.  :** *  :*: .:.*          * :  .: :**

AT2G28610.1     EEILMQKSITGPNSSYGRDWMMMMDMGPRPSYPSSSSSPIS-------------------
Sb011646_Sorbi1 -----GNKATGAGGGYG---------GGAALYNSCSSNQLEEWDPAEAMEHCNASCGAAS
                      :. **....**         *  . * *.**. :.                   

AT2G28610.1     ---------------CCNMMMSSPKIPLKTLELFPISSI-------NSKQDSTKL---
Sb011646_Sorbi1 GSSDEGGAAHLQLPPCC-------RRPLKTLDLFPTKSTGLKDECSSSKSSSCSTSTN
                               **       : *****:*** .*        .**..* .
BoxShade v3.31 C (beta, 970507) Output
AT2G28610.1     M S P V A S T R W C P T P E Q L M I L E E M Y R S G I R T P N A V Q I Q Q I T A H L A F Y G R I E G K N V F Y W F Q N H
Sb011646_Sorbi1    M P Q T P S T R W C P T P E Q L M I L E E M Y R S G V R T P N A A E I Q Q I T A H L A Y Y G R I E G K N V F Y W F Q N H
 
AT2G28610.1     K A R D R Q K L R K K L A K Q L H Q Q Q H Q L Q L Q L Q Q I K P K P I S S M I S Q P V N K N I I D H H N P Y H H H H H N
Sb011646_Sorbi1    K A R E R Q R L R R R L C A R - H Q Q Q Y A Q Q Q Q Q Q A T A A A P S S S P L P S P A A G G S S A G V H P A V M Q L H Q
 
AT2G28610.1     H H H N H H R P Y D H M S F D C C S H P S P M C L P H Q G T G V G E A P S K V - - - - - - - - - - M N E Y Y C T K S G A
Sb011646_Sorbi1    H H H - - - - P Y - - - - - - - - - - - A T N F V P H L G Y - L G Q Q A A T V P P V L N P A A A G M V D L A A A G A G A
 
AT2G28610.1     E E I L M Q K S I T G P N S S Y G R D W M M M M D M G P R P S Y P S S S S S P I S - - - - - - - - - - - - - - - - - - -
Sb011646_Sorbi1    - - - - - G N K A T G A G G G Y G - - - - - - - - - G G A A L Y N S C S S N Q L E E W D P A E A M E H C N A S C G A A S
 
AT2G28610.1     - - - - - - - - - - - - - - - C C N M M M S S P K I P L K T L E L F P I S S I - - - - - - - N S K Q D S T K L - - -
Sb011646_Sorbi1    G S S D E G G A A H L Q L P P C C - - - - - - - R R P L K T L D L F P T K S T G L K D E C S S S K S S S C S T S T N
 
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