fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28610.1 HQQQHQLQLQLQQIKP at 81/244 in AT2G28610.1
KIPLKTLELFPISSIN at 225/244 in AT2G28610.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm049699 TRPLKTLDLFPLTTTR in 202/223 AT2G28610.1 1st_1st 0.383116883 Ib
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Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G28610.1     MSPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNH
gm049699_Glyma1 MSPAGSSRWSPTTEQLMILEELYRSGIRTPSASQIQQITTHLSFYGRIEGKNVFYWFQNH
                ***..*:**.**.********:********.* ******:**:*****************

AT2G28610.1     KARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHHH---
gm049699_Glyma1 KARDRQKLRRKLTKQLQLQQQQQQQQFQ-------------------------LHHHCQQ
                *********:**:***: **:* * *:*                          ***   

AT2G28610.1     -HHNHHHNH---HRPYDHMSFDCCSHPSPMCLPH--------QGTGVGEA---------P
gm049699_Glyma1 LNQDHITNHFVGNLPFQTMHAQSLSN---LCLAYSYFSEGIAQRMGLGKAIFEGGAANTP
                 :::*  **   : *:: *  :. *:   :**.:        *  *:*:*         *

AT2G28610.1     SKVMNEYYCTKSGAEEILMQKSITGPNSSYGRDWMMMMDMGPRPSYPSSSSSPISCCNMM
gm049699_Glyma1 EQALSCKWNVHNPQSNLVENKEMAFCN--YG--W-TLVDVDNQAS---------SCCTTR
                .:.:.  : .:.  .::: :*.::  *  **  *  ::*:. :.*         ***.  

AT2G28610.1     MSSPKIPLKTLELFPISSINSKQDSTKL---
gm049699_Glyma1 ------PLKTLDLFPLTTTRINEDCTATPPK
                      *****:***::: . ::*.*
BoxShade v3.31 C (beta, 970507) Output
AT2G28610.1     M S P V A S T R W C P T P E Q L M I L E E M Y R S G I R T P N A V Q I Q Q I T A H L A F Y G R I E G K N V F Y W F Q N H
gm049699_Glyma1    M S P A G S S R W S P T T E Q L M I L E E L Y R S G I R T P S A S Q I Q Q I T T H L S F Y G R I E G K N V F Y W F Q N H
 
AT2G28610.1     K A R D R Q K L R K K L A K Q L H Q Q Q H Q L Q L Q L Q Q I K P K P I S S M I S Q P V N K N I I D H H N P Y H H H - - -
gm049699_Glyma1    K A R D R Q K L R R K L T K Q L Q L Q Q Q Q Q Q Q Q F Q - - - - - - - - - - - - - - - - - - - - - - - - - L H H H C Q Q
 
AT2G28610.1     - H H N H H H N H - - - H R P Y D H M S F D C C S H P S P M C L P H - - - - - - - - Q G T G V G E A - - - - - - - - - P
gm049699_Glyma1    L N Q D H I T N H F V G N L P F Q T M H A Q S L S N - - - L C L A Y S Y F S E G I A Q R M G L G K A I F E G G A A N T P
 
AT2G28610.1     S K V M N E Y Y C T K S G A E E I L M Q K S I T G P N S S Y G R D W M M M M D M G P R P S Y P S S S S S P I S C C N M M
gm049699_Glyma1    E Q A L S C K W N V H N P Q S N L V E N K E M A F C N - - Y G - - W - T L V D V D N Q A S - - - - - - - - - S C C T T R
 
AT2G28610.1     M S S P K I P L K T L E L F P I S S I N S K Q D S T K L - - -
gm049699_Glyma1    - - - - - - P L K T L D L F P L T T T R I N E D C T A T P P K
 
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