fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28710.1 GKRVLCLDLNLTPLEN at 133/156 in AT2G28710.1
EDLKLELGRFIF at 145/156 in AT2G28710.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os004620 DGGGVCLDLNLTPSEN in 179/217 AT2G28710.1 1st_1st 0.354838709 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G28710.1     -MERGRS--DM-EMINNM--ANCLILLSKAHQN-------------------DTKSRVFA
Os004620_Os01t0 MSKRSRSMWDMQEFVGSVDTARVLMLLAQQSQHGLLGGGGFAAGAQPVVVRGGAHDRVFE
                  :*.**  ** *::..:  *. *:**::  *:                   .::.*** 

AT2G28710.1     CKTCNKEFPSFQALGGHRASHRRSAALEGHA-------------------PPSPKRVKPV
Os004620_Os01t0 CKTCNRQFPTFQALGGHRASHKRPRQQQQHALGGGAGADDAGLCLGRQPTPPRPQPAKPR
                *****::**:***********:*.   : **                   ** *: .** 

AT2G28710.1     KHECPICGAEFAVGQALGGHMRKHRGGSGGGGGRSLAPATAPVTMKKSG-----------
Os004620_Os01t0 VHECPVCGLEFPIGQALGGHMRRHR-------AEAEAAATTTTTTTKNGDVGKAAAVKAC
                 ****:** **.:*********:**       ..: *.**:..* .*.*           

AT2G28710.1     -GGNGKRVLCLDLNLTPLEN------------------EDLKLELGRFIF
Os004620_Os01t0 DGGG----VCLDLNLTPSENRAKCRNVVGLGAGGQGVHKALAM-LDCFL-
                 **.    :******** **                  : * : *. *:
BoxShade v3.31 C (beta, 970507) Output
AT2G28710.1     - M E R G R S - - D M - E M I N N M - - A N C L I L L S K A H Q N - - - - - - - - - - - - - - - - - - - D T K S R V F A
Os004620_Os01t0    M S K R S R S M W D M Q E F V G S V D T A R V L M L L A Q Q S Q H G L L G G G G F A A G A Q P V V V R G G A H D R V F E
 
AT2G28710.1     C K T C N K E F P S F Q A L G G H R A S H R R S A A L E G H A - - - - - - - - - - - - - - - - - - - P P S P K R V K P V
Os004620_Os01t0    C K T C N R Q F P T F Q A L G G H R A S H K R P R Q Q Q Q H A L G G G A G A D D A G L C L G R Q P T P P R P Q P A K P R
 
AT2G28710.1     K H E C P I C G A E F A V G Q A L G G H M R K H R G G S G G G G G R S L A P A T A P V T M K K S G - - - - - - - - - - -
Os004620_Os01t0    V H E C P V C G L E F P I G Q A L G G H M R R H R - - - - - - - A E A E A A A T T T T T T T K N G D V G K A A A V K A C
 
AT2G28710.1     - G G N G K R V L C L D L N L T P L E N - - - - - - - - - - - - - - - - - - E D L K L E L G R F I F
Os004620_Os01t0    D G G G - - - - V C L D L N L T P S E N R A K C R N V V G L G A G G Q G V H K A L A M - L D C F L -
 
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