Input
| Putative repression domain
|
|
AT2G28710.1 |
GKRVLCLDLNLTPLEN at 133/156 in AT2G28710.1 |
|
EDLKLELGRFIF at 145/156 in AT2G28710.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm041121 |
KDGDQKLNLRLDLNLT in 142/172 |
AT2G28710.1 |
1st_1st |
0.401433691 |
Ia |
PLEEDDLKLNLRTPVL in 158/172 |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G28710.1 MERGRSDMEMINNMANCLILLSKAHQNDTKSRV--------FACKTCNKEFPSFQALGGH
gm041121_Glyma1 MKRGREESKL--DMANCLMLLTKVGESETNYPISKGSDIGDFKCKTCNRRFSSFQALGGH
*:***.: :: :*****:**:*. :.:*: : * *****:.*.********
AT2G28710.1 RASHRRS----AALEGHAP-PSPK-RVKPVKHECPICGAEFAVGQALGGHMRKHRGGSGG
gm041121_Glyma1 RASHKKPKLMVTDLSCHQELPNPTMKQQPRMHPCPICGLEFAIGQALGGHMRKHRTAIND
****::. : *. * *.*. : :* * ***** ***:************ . ..
AT2G28710.1 G--GGRSLAPATAPVTMKKSG-GGNGKRVLCLDLNLTPLENEDLKLELGR-----FIF
gm041121_Glyma1 GLLCGK---PSSSLSILKESSKDGDQKLNLRLDLNLTPLEEDDLKLNLRTPVLNCFI-
* *: *::: :*:*. .*: * * *********::****:* **
BoxShade v3.31 C (beta, 970507) Output
AT2G28710.1 |
M |
E |
R |
G |
R |
S |
D |
M |
E |
M |
I |
N |
N |
M |
A |
N |
C |
L |
I |
L |
L |
S |
K |
A |
H |
Q |
N |
D |
T |
K |
S |
R |
V |
- |
- |
- |
- |
- |
- |
- |
- |
F |
A |
C |
K |
T |
C |
N |
K |
E |
F |
P |
S |
F |
Q |
A |
L |
G |
G |
H |
gm041121_Glyma1 |
M |
K |
R |
G |
R |
E |
E |
S |
K |
L |
- |
- |
D |
M |
A |
N |
C |
L |
M |
L |
L |
T |
K |
V |
G |
E |
S |
E |
T |
N |
Y |
P |
I |
S |
K |
G |
S |
D |
I |
G |
D |
F |
K |
C |
K |
T |
C |
N |
R |
R |
F |
S |
S |
F |
Q |
A |
L |
G |
G |
H |
|
AT2G28710.1 |
R |
A |
S |
H |
R |
R |
S |
- |
- |
- |
- |
A |
A |
L |
E |
G |
H |
A |
P |
- |
P |
S |
P |
K |
- |
R |
V |
K |
P |
V |
K |
H |
E |
C |
P |
I |
C |
G |
A |
E |
F |
A |
V |
G |
Q |
A |
L |
G |
G |
H |
M |
R |
K |
H |
R |
G |
G |
S |
G |
G |
gm041121_Glyma1 |
R |
A |
S |
H |
K |
K |
P |
K |
L |
M |
V |
T |
D |
L |
S |
C |
H |
Q |
E |
L |
P |
N |
P |
T |
M |
K |
Q |
Q |
P |
R |
M |
H |
P |
C |
P |
I |
C |
G |
L |
E |
F |
A |
I |
G |
Q |
A |
L |
G |
G |
H |
M |
R |
K |
H |
R |
T |
A |
I |
N |
D |
|
AT2G28710.1 |
G |
- |
- |
G |
G |
R |
S |
L |
A |
P |
A |
T |
A |
P |
V |
T |
M |
K |
K |
S |
G |
- |
G |
G |
N |
G |
K |
R |
V |
L |
C |
L |
D |
L |
N |
L |
T |
P |
L |
E |
N |
E |
D |
L |
K |
L |
E |
L |
G |
R |
- |
- |
- |
- |
- |
F |
I |
F |
gm041121_Glyma1 |
G |
L |
L |
C |
G |
K |
- |
- |
- |
P |
S |
S |
S |
L |
S |
I |
L |
K |
E |
S |
S |
K |
D |
G |
D |
Q |
K |
L |
N |
L |
R |
L |
D |
L |
N |
L |
T |
P |
L |
E |
E |
D |
D |
L |
K |
L |
N |
L |
R |
T |
P |
V |
L |
N |
C |
F |
I |
- |
|
|