fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028844 not found in 332aa AT2G28810.1 1st_1st 0.313513513 Ib
Pp011962 not found in 393aa AT2G28810.1 1st_1st 0.210810810 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G28810.1     MVFSSVSSFLDPPI---------NWPQSANPNNHPHHHQLQENGSLVSGHHQVLSHHFPQ
pt028844_POPTR_ MVFSSVPFYLDPP----------NWQQ--QPLNFS---ILQQQPSQQPG----ASNESPQ
pp011962_Pp1s12 MV------NVEKPHMSVAVLGHGDWAM--IPS---------------------SSSHEPQ
                **       :: *          :*     *                       * . **

AT2G28810.1     NP--NPNHHHVETAAATTVDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYF
pt028844_POPTR_ LPPLPPPTHVGGSGTAGTIRPGSM----ADRARLAKIPQ-PEVALKCPRCESTNTKFCYF
pp011962_Pp1s12 Q---QTQQHQQEKKASQLF---------AQRALQERRLKPPDQVIACPRCQSLNTKFCYY
                     .  *   . ::  .         *:**   :  : *: .: ****:* ******:

AT2G28810.1     NNYNLTQPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGKSGNSKSSSSSQNKQSTSMV
pt028844_POPTR_ NNYNLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKKRKVQSSSKSPVSSERQVGSTS
pp011962_Pp1s12 NNYSLTQPRHFCKSCRRYWTAGGTLRNVPVGGGCRKNKRTKPRTPEGSNSGTGSADVDSM
                ***.*:*******:****** **:**.********:**: *  ... *  .      .  

AT2G28810.1     NATS-------PTNTSNVQLQTNSQF----PFLPTLQNLTQL--GGIGLNLAAINGNNGG
pt028844_POPTR_ SSTSA-----LPSQVIGHLPQQQSQL----PYMTSLHNLAQFGEGNIGLNFGGIQGQLGS
pp011962_Pp1s12 SSSGLQHPGFTPTSIGFLSSSEGSPYGLADPSIRADSSMSQS--SKIGLPMPY---QPGG
                .::.       *:.      .  *      * : :  .::*   . *** :     : *.

AT2G28810.1     NGNTSSSF---------LNDLGFFHGGNTSGPVMGNNNENNLMTSLGSSSHFALFDRT--
pt028844_POPTR_ TSGASGQ-----------TDMGFQIGSNS-----GMN--SSAILSAGGVHQFPFFEFSP-
pp011962_Pp1s12 QSSALAQHQQLHPFEGGIPGLGFFRNPGRVAET-ALNLHPTFQMPTGDLSE--MFDTSSV
                 ..: ..            .:**  . .      . *   .   . *.  .  :*: :  

AT2G28810.1     ------------MGLYNFPNE-------------------------------VNMGLSSI
pt028844_POPTR_ ------------AGLYPLQSEGAETP---ISV------------------HGDNQLQSMT
pp011962_Pp1s12 SRTGALAALSEGLGTFNVNAEGGRDQQGFVSLERWQQAAKQHSSSGMWGSHEIAQAQSNI
                             * : .  *                                    *  

AT2G28810.1     GATRVSQ--------TAQVK-MEDNHLGNISRPVSGL--TSPG--------NQSNQYWTG
pt028844_POPTR_ SSSRVSQ--------LAPVK-TEGNQGLNLSKPYLG----AP----------QNNQYYWG
pp011962_Pp1s12 GMGRQQDVKGKMTLGLVPITGMDTSKGQQQQRPTPSWQHSNPPENSGLHFEQQPEQNYWN
                .  * .:         . :.  : .:  : .:*  .     *          * :* : .

AT2G28810.1     -------QGLPGSSSNDHHH----QHLM-
pt028844_POPTR_ GNTWADLSGLNSSSTS---------HLLR
pp011962_Pp1s12 NS-----GGWPSMDSQAYQSSGGGQAL--
                        *  . .:.          *
BoxShade v3.31 C (beta, 970507) Output
AT2G28810.1     M V F S S V S S F L D P P I - - - - - - - - - N W P Q S A N P N N H P H H H Q L Q E N G S L V S G H H Q V L S H H F P Q
pt028844_POPTR_    M V F S S V P F Y L D P P - - - - - - - - - - N W Q Q - - Q P L N F S - - - I L Q Q Q P S Q Q P G - - - - A S N E S P Q
pp011962_Pp1s12    M V - - - - - - N V E K P H M S V A V L G H G D W A M - - I P S - - - - - - - - - - - - - - - - - - - - - S S S H E P Q
 
AT2G28810.1     N P - - N P N H H H V E T A A A T T V D P S S L N G Q A A E R A R L A K N S Q P P E G A L K C P R C D S A N T K F C Y F
pt028844_POPTR_    L P P L P P P T H V G G S G T A G T I R P G S M - - - - A D R A R L A K I P Q - P E V A L K C P R C E S T N T K F C Y F
pp011962_Pp1s12    Q - - - Q T Q Q H Q Q E K K A S Q L F - - - - - - - - - A Q R A L Q E R R L K P P D Q V I A C P R C Q S L N T K F C Y Y
 
AT2G28810.1     N N Y N L T Q P R H F C K A C R R Y W T R G G A L R N V P V G G G C R R N K K G K S G N S K S S S S S Q N K Q S T S M V
pt028844_POPTR_    N N Y N L S Q P R H F C K T C R R Y W T R G G A L R S V P V G G G C R R N K K R K V Q S S S K S P V S S E R Q V G S T S
pp011962_Pp1s12    N N Y S L T Q P R H F C K S C R R Y W T A G G T L R N V P V G G G C R K N K R T K P R T P E G S N S G T G S A D V D S M
 
AT2G28810.1     N A T S - - - - - - - P T N T S N V Q L Q T N S Q F - - - - P F L P T L Q N L T Q L - - G G I G L N L A A I N G N N G G
pt028844_POPTR_    S S T S A - - - - - L P S Q V I G H L P Q Q Q S Q L - - - - P Y M T S L H N L A Q F G E G N I G L N F G G I Q G Q L G S
pp011962_Pp1s12    S S S G L Q H P G F T P T S I G F L S S S E G S P Y G L A D P S I R A D S S M S Q S - - S K I G L P M P Y - - - Q P G G
 
AT2G28810.1     N G N T S S S F - - - - - - - - - L N D L G F F H G G N T S G P V M G N N N E N N L M T S L G S S S H F A L F D R T - -
pt028844_POPTR_    T S G A S G Q - - - - - - - - - - - T D M G F Q I G S N S - - - - - G M N - - S S A I L S A G G V H Q F P F F E F S P -
pp011962_Pp1s12    Q S S A L A Q H Q Q L H P F E G G I P G L G F F R N P G R V A E T - A L N L H P T F Q M P T G D L S E - - M F D T S S V
 
AT2G28810.1     - - - - - - - - - - - - M G L Y N F P N E - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - V N M G L S S I
pt028844_POPTR_    - - - - - - - - - - - - A G L Y P L Q S E G A E T P - - - I S V - - - - - - - - - - - - - - - - - - H G D N Q L Q S M T
pp011962_Pp1s12    S R T G A L A A L S E G L G T F N V N A E G G R D Q Q G F V S L E R W Q Q A A K Q H S S S G M W G S H E I A Q A Q S N I
 
AT2G28810.1     G A T R V S Q - - - - - - - - T A Q V K - M E D N H L G N I S R P V S G L - - T S P G - - - - - - - - N Q S N Q Y W T G
pt028844_POPTR_    S S S R V S Q - - - - - - - - L A P V K - T E G N Q G L N L S K P Y L G - - - - A P - - - - - - - - - - Q N N Q Y Y W G
pp011962_Pp1s12    G M G R Q Q D V K G K M T L G L V P I T G M D T S K G Q Q Q Q R P T P S W Q H S N P P E N S G L H F E Q Q P E Q N Y W N
 
AT2G28810.1     - - - - - - - Q G L P G S S S N D H H H - - - - Q H L M -
pt028844_POPTR_    G N T W A D L S G L N S S S T S - - - - - - - - - H L L R
pp011962_Pp1s12    N S - - - - - G G W P S M D S Q A Y Q S S G G G Q A L - -
 
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