fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp011962 not found in 393aa AT2G28810.1 1st_1st 0.210810810 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G28810.1     MVFSSVSSFLDPPINWPQSANPNNHPHHHQLQENGSLVSGHHQ-----VLSHHFPQNPNP
pp011962_Pp1s12 MV--------------------NVEKPHMSVA-----VLGHGDWAMIPSSSSHEPQQQTQ
                **                    * .  * .:      * ** :       * * **: . 

AT2G28810.1     NHHHVETAAATTVDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLT
pp011962_Pp1s12 QHQQEKKASQLF----------AQRALQERRLKPPDQVIACPRCQSLNTKFCYYNNYSLT
                :*:: :.*:             *:**   :. :**: .: ****:* ******:***.**

AT2G28810.1     QPRHFCKACRRYWTRGGALRNVPVGGGCRRNKKGK-----SGNSKSSSSSQNKQSTSMVN
pp011962_Pp1s12 QPRHFCKSCRRYWTAGGTLRNVPVGGGCRKNKRTKPRTPEGSNSGTGSADVDSMSSSGLQ
                *******:****** **:***********:**: *     ..** :.*:. :. *:* ::

AT2G28810.1     ATSPTNTSNVQLQTNSQFPF---LPTLQ---NLTQLGGIGLNLAAINGNNGGNGNTSS--
pp011962_Pp1s12 HPGFTPTSIGFLSSSEGSPYGLADPSIRADSSMSQSSKIGLPMPYQPG-----GQSSALA
                 .. * **   *.:..  *:    *:::   .::* . *** :.   *     *::*:  

AT2G28810.1     ---------SFLNDLGFFHG-GNTSGPVM----------GNNNENNLMTSLGSSSHFALF
pp011962_Pp1s12 QHQQLHPFEGGIPGLGFFRNPGRVAETALNLHPTFQMPTGDLSEMFDTSSVSRTGALAAL
                         . : .****:. *..: ..:          *: .*    :*:. :. :* :

AT2G28810.1     DRTMGLYNF-------------------------------PNEVNMGLSSIGATRVSQTA
pp011962_Pp1s12 SEGLGTFNVNAEGGRDQQGFVSLERWQQAAKQHSSSGMWGSHEIAQAQSNIGMGR-QQDV
                .. :* :*.                               .:*:  . *.**  * .* .

AT2G28810.1     QVKMEDNHLGNISRPVSGL-TSPGNQSNQ-------------------------YWTGQ-
pp011962_Pp1s12 KGKMT---LGLV--PITGMDTSKGQQQQRPTPSWQHSNPPENSGLHFEQQPEQNYWNNSG
                : **    ** :  *::*: ** *:*.::                         **... 

AT2G28810.1     GLPGSSSNDHHH----QHLM
pp011962_Pp1s12 GWPSMDSQAYQSSGGGQAL-
                * *. .*: ::     * *
BoxShade v3.31 C (beta, 970507) Output
AT2G28810.1     M V F S S V S S F L D P P I N W P Q S A N P N N H P H H H Q L Q E N G S L V S G H H Q - - - - - V L S H H F P Q N P N P
pp011962_Pp1s12    M V - - - - - - - - - - - - - - - - - - - - N V E K P H M S V A - - - - - V L G H G D W A M I P S S S S H E P Q Q Q T Q
 
AT2G28810.1     N H H H V E T A A A T T V D P S S L N G Q A A E R A R L A K N S Q P P E G A L K C P R C D S A N T K F C Y F N N Y N L T
pp011962_Pp1s12    Q H Q Q E K K A S Q L F - - - - - - - - - - A Q R A L Q E R R L K P P D Q V I A C P R C Q S L N T K F C Y Y N N Y S L T
 
AT2G28810.1     Q P R H F C K A C R R Y W T R G G A L R N V P V G G G C R R N K K G K - - - - - S G N S K S S S S S Q N K Q S T S M V N
pp011962_Pp1s12    Q P R H F C K S C R R Y W T A G G T L R N V P V G G G C R K N K R T K P R T P E G S N S G T G S A D V D S M S S S G L Q
 
AT2G28810.1     A T S P T N T S N V Q L Q T N S Q F P F - - - L P T L Q - - - N L T Q L G G I G L N L A A I N G N N G G N G N T S S - -
pp011962_Pp1s12    H P G F T P T S I G F L S S S E G S P Y G L A D P S I R A D S S M S Q S S K I G L P M P Y Q P G - - - - - G Q S S A L A
 
AT2G28810.1     - - - - - - - - - S F L N D L G F F H G - G N T S G P V M - - - - - - - - - - G N N N E N N L M T S L G S S S H F A L F
pp011962_Pp1s12    Q H Q Q L H P F E G G I P G L G F F R N P G R V A E T A L N L H P T F Q M P T G D L S E M F D T S S V S R T G A L A A L
 
AT2G28810.1     D R T M G L Y N F - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P N E V N M G L S S I G A T R V S Q T A
pp011962_Pp1s12    S E G L G T F N V N A E G G R D Q Q G F V S L E R W Q Q A A K Q H S S S G M W G S H E I A Q A Q S N I G M G R - Q Q D V
 
AT2G28810.1     Q V K M E D N H L G N I S R P V S G L - T S P G N Q S N Q - - - - - - - - - - - - - - - - - - - - - - - - - Y W T G Q -
pp011962_Pp1s12    K G K M T - - - L G L V - - P I T G M D T S K G Q Q Q Q R P T P S W Q H S N P P E N S G L H F E Q Q P E Q N Y W N N S G
 
AT2G28810.1     G L P G S S S N D H H H - - - - Q H L M
pp011962_Pp1s12    G W P S M D S Q A Y Q S S G G G Q A L -
 
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