fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G28810.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028844 not found in 332aa AT2G28810.1 1st_1st 0.313513513 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G28810.1     MVFSSVSSFLDPPINWPQSANPNNHPHHHQLQENGSLVSGHHQVLSHHFPQNP--NPNHH
pt028844_POPTR_ MVFSSVPFYLDPP-NWQQ--QPLNFS---ILQQQPSQQPG----ASNESPQLPPLPPPTH
                ******. :**** ** *  :* *..    **:: *  .*     *:. ** *   *  *

AT2G28810.1     HVETAAATTVDPSSLNGQAAERARLAKNSQPPEGALKCPRCDSANTKFCYFNNYNLTQPR
pt028844_POPTR_ VGGSGTAGTIRPGSM----ADRARLAKIPQ-PEVALKCPRCESTNTKFCYFNNYNLSQPR
                   :.:* *: *.*:    *:****** .* ** *******:*:************:***

AT2G28810.1     HFCKACRRYWTRGGALRNVPVGGGCRRNKKGKSGNSKSSSSSQNKQSTSMVNATS--PTN
pt028844_POPTR_ HFCKTCRRYWTRGGALRSVPVGGGCRRNKKRKVQSSSKSPVSSERQVGSTSSSTSALPSQ
                ****:************.************ *  .*..*. *.::*  *  .:**  *::

AT2G28810.1     TSNVQLQTNSQFPFLPTLQNLTQL--GGIGLNLAAINGNNGGNGNTSSSFLNDLGFFHGG
pt028844_POPTR_ VIGHLPQQQSQLPYMTSLHNLAQFGEGNIGLNFGGIQGQLGSTSGASGQ--TDMGFQIGS
                . .   * :**:*::.:*:**:*:  *.****:..*:*: *....:*..  .*:**  *.

AT2G28810.1     NTSGPVMGNNNENNLMTSLGSSSHFALFDRT-MGLYNFPNE----------VNMGLSSIG
pt028844_POPTR_ NS-----GMN--SSAILSAGGVHQFPFFEFSPAGLYPLQSEGAETPISVHGDNQLQSMTS
                *:     * *  .. : * *.  :*.:*: :  *** : .*           *   *  .

AT2G28810.1     ATRVSQTAQVKMEDNHLGNISRPVSGLTSPGNQSNQYWTG-------QGLPGSSSNDHHH
pt028844_POPTR_ SSRVSQLAPVKTEGNQGLNLSKPYLG--AP--QNNQYYWGGNTWADLSGLNSSSTS----
                ::**** * ** *.*:  *:*:*  *  :*  *.***: *       .** .**:.    

AT2G28810.1     QHLM-
pt028844_POPTR_ -HLLR
                 **:
BoxShade v3.31 C (beta, 970507) Output
AT2G28810.1     M V F S S V S S F L D P P I N W P Q S A N P N N H P H H H Q L Q E N G S L V S G H H Q V L S H H F P Q N P - - N P N H H
pt028844_POPTR_    M V F S S V P F Y L D P P - N W Q Q - - Q P L N F S - - - I L Q Q Q P S Q Q P G - - - - A S N E S P Q L P P L P P P T H
 
AT2G28810.1     H V E T A A A T T V D P S S L N G Q A A E R A R L A K N S Q P P E G A L K C P R C D S A N T K F C Y F N N Y N L T Q P R
pt028844_POPTR_    V G G S G T A G T I R P G S M - - - - A D R A R L A K I P Q - P E V A L K C P R C E S T N T K F C Y F N N Y N L S Q P R
 
AT2G28810.1     H F C K A C R R Y W T R G G A L R N V P V G G G C R R N K K G K S G N S K S S S S S Q N K Q S T S M V N A T S - - P T N
pt028844_POPTR_    H F C K T C R R Y W T R G G A L R S V P V G G G C R R N K K R K V Q S S S K S P V S S E R Q V G S T S S S T S A L P S Q
 
AT2G28810.1     T S N V Q L Q T N S Q F P F L P T L Q N L T Q L - - G G I G L N L A A I N G N N G G N G N T S S S F L N D L G F F H G G
pt028844_POPTR_    V I G H L P Q Q Q S Q L P Y M T S L H N L A Q F G E G N I G L N F G G I Q G Q L G S T S G A S G Q - - T D M G F Q I G S
 
AT2G28810.1     N T S G P V M G N N N E N N L M T S L G S S S H F A L F D R T - M G L Y N F P N E - - - - - - - - - - V N M G L S S I G
pt028844_POPTR_    N S - - - - - G M N - - S S A I L S A G G V H Q F P F F E F S P A G L Y P L Q S E G A E T P I S V H G D N Q L Q S M T S
 
AT2G28810.1     A T R V S Q T A Q V K M E D N H L G N I S R P V S G L T S P G N Q S N Q Y W T G - - - - - - - Q G L P G S S S N D H H H
pt028844_POPTR_    S S R V S Q L A P V K T E G N Q G L N L S K P Y L G - - A P - - Q N N Q Y Y W G G N T W A D L S G L N S S S T S - - - -
 
AT2G28810.1     Q H L M -
pt028844_POPTR_    - H L L R
 
0