fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp005269 not found in 189aa AT2G40470.1 1st_not 0.482666666 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G30340.1     -MSREREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLL
pp005269_Pp1s15 MLSSQGQG------------------------------------------STPCAACKLL
                 :* : :*                                           *********

AT2G30340.1     RRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLR
pp005269_Pp1s15 RRRCAQECPFSPYFSPHEPQKFACVHKIFGASNVSKMLMEVPENQRADAASSLVYEANAR
                *****:*************:***.***:**********:** *.**.***.******* *

AT2G30340.1     LRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSV
pp005269_Pp1s15 IRDPVYGCMGAISALQQQAQALQAELSAVRQEITRYRQHDSSPTDSAP----ATTTTSA-
                :***:***********:: *:**:**::** ** *:: ::::.  *      :*****: 

AT2G30340.1     SCDQHALASAILLPPPPPPPPTPRPPRLLSS----QPAPPPTPPV--SLPSPSMVVSSSS
pp005269_Pp1s15 ----SALVSGY-----------QKQVRERGSTSDTQSSKPSTSEVYTTVQSPSSTVATSE
                     **.*.             :  *  .*    *.: *.*. *  :: *** .*::*.

AT2G30340.1     SSNSSATNSMYNPPPSSTAGYSNSLSSDNNVHYFD
pp005269_Pp1s15 SND---------------APYWSSIS---------
                *.:               * * .*:*
BoxShade v3.31 C (beta, 970507) Output
AT2G30340.1     - M S R E R E G F G E Y Y E T V K K I K K D P A F E T T T D H A V M G I R R H V A V P P G T T L N T V T P C A A C K L L
pp005269_Pp1s15    M L S S Q G Q G - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S T P C A A C K L L
 
AT2G30340.1     R R R C A E E C P F S P Y F S P H E P H K F A A V H K V F G A S N V S K M L L E V G E S Q R G D A A N S L V Y E A N L R
pp005269_Pp1s15    R R R C A Q E C P F S P Y F S P H E P Q K F A C V H K I F G A S N V S K M L M E V P E N Q R A D A A S S L V Y E A N A R
 
AT2G30340.1     L R D P I Y G C M G A I S A L Q H H I Q S L Q S E L T T V R T E I L R H K Y Q E A T T I T S L Q N N F N S T T T T S S V
pp005269_Pp1s15    I R D P V Y G C M G A I S A L Q Q Q A Q A L Q A E L S A V R Q E I T R Y R Q H D S S P T D S A P - - - - A T T T T S A -
 
AT2G30340.1     S C D Q H A L A S A I L L P P P P P P P P T P R P P R L L S S - - - - Q P A P P P T P P V - - S L P S P S M V V S S S S
pp005269_Pp1s15    - - - - S A L V S G Y - - - - - - - - - - - Q K Q V R E R G S T S D T Q S S K P S T S E V Y T T V Q S P S S T V A T S E
 
AT2G30340.1     S S N S S A T N S M Y N P P P S S T A G Y S N S L S S D N N V H Y F D
pp005269_Pp1s15    S N D - - - - - - - - - - - - - - - A P Y W S S I S - - - - - - - - -
 
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