fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp011458 not found in 212aa AT2G40470.1 not_not 0.472 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G30340.1     -MSREREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLL
pp011458_Pp1s9_ MLVHSRAQHGE-----RKVKS-PTTES---------RKKMLNSQG---QGSTPCAACKLL
                 : :.*  .**     :*:*. *: *:         *:::  . *   :  *********

AT2G30340.1     RRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLR
pp011458_Pp1s9_ RRRCAQECPFSPYFSPQEPQKFACVHKIFGASNVSKMLMEVPENQRADAASSLVYEANAR
                *****:**********:**:***.***:**********:** *.**.***.******* *

AT2G30340.1     LRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSS-
pp011458_Pp1s9_ IRDPVYGCMGAISALQQQAQALQAELNAVRMEINRYRQHENSP-----TNGTLTTTASAT
                :***:***********:: *:**:**.:** ** *:: :* :.     .* . ***:*: 

AT2G30340.1     --VSCDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPV--SLPSPSMVVSSSSS
pp011458_Pp1s9_ ALVSGYQELVQDR---------------GRASDTRSSKPSTTDVHTTVHSPSSTVATSES
                  **  *. : .                 *  .::.: *.*. *  :: *** .*::*.*

AT2G30340.1     SNSSATNSMYNPPPSSTAGYSNSLSSDNNVHYFD
pp011458_Pp1s9_ KDRT-----YWSPIT-------------------
                .: :     * .* :
BoxShade v3.31 C (beta, 970507) Output
AT2G30340.1     - M S R E R E G F G E Y Y E T V K K I K K D P A F E T T T D H A V M G I R R H V A V P P G T T L N T V T P C A A C K L L
pp011458_Pp1s9_    M L V H S R A Q H G E - - - - - R K V K S - P T T E S - - - - - - - - - R K K M L N S Q G - - - Q G S T P C A A C K L L
 
AT2G30340.1     R R R C A E E C P F S P Y F S P H E P H K F A A V H K V F G A S N V S K M L L E V G E S Q R G D A A N S L V Y E A N L R
pp011458_Pp1s9_    R R R C A Q E C P F S P Y F S P Q E P Q K F A C V H K I F G A S N V S K M L M E V P E N Q R A D A A S S L V Y E A N A R
 
AT2G30340.1     L R D P I Y G C M G A I S A L Q H H I Q S L Q S E L T T V R T E I L R H K Y Q E A T T I T S L Q N N F N S T T T T S S -
pp011458_Pp1s9_    I R D P V Y G C M G A I S A L Q Q Q A Q A L Q A E L N A V R M E I N R Y R Q H E N S P - - - - - T N G T L T T T A S A T
 
AT2G30340.1     - - V S C D Q H A L A S A I L L P P P P P P P P T P R P P R L L S S Q P A P P P T P P V - - S L P S P S M V V S S S S S
pp011458_Pp1s9_    A L V S G Y Q E L V Q D R - - - - - - - - - - - - - - - G R A S D T R S S K P S T T D V H T T V H S P S S T V A T S E S
 
AT2G30340.1     S N S S A T N S M Y N P P P S S T A G Y S N S L S S D N N V H Y F D
pp011458_Pp1s9_    K D R T - - - - - Y W S P I T - - - - - - - - - - - - - - - - - - -
 
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