fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp005269 not found in 189aa AT2G40470.1 1st_not 0.482666666 II
Pp011458 not found in 212aa AT2G40470.1 not_not 0.472 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G30340.1     -MSREREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNT----VTPCAA
pp005269_Pp1s15 ----------------------------------------------MLSSQGQGSTPCAA
pp011458_Pp1s9_ MLVHSRAQHGE-----RKVKS-PTTES---------RK-------KMLNSQGQGSTPCAA
                                                               *.:     *****

AT2G30340.1     CKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYE
pp005269_Pp1s15 CKLLRRRCAQECPFSPYFSPHEPQKFACVHKIFGASNVSKMLMEVPENQRADAASSLVYE
pp011458_Pp1s9_ CKLLRRRCAQECPFSPYFSPQEPQKFACVHKIFGASNVSKMLMEVPENQRADAASSLVYE
                *********:**********:**:***.***:**********:** *.**.***.*****

AT2G30340.1     ANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTT
pp005269_Pp1s15 ANARIRDPVYGCMGAISALQQQAQALQAELSAVRQEITRYRQHDSSPTDSA-----PATT
pp011458_Pp1s9_ ANARIRDPVYGCMGAISALQQQAQALQAELNAVRMEINRYRQHENSPTNGT------LTT
                ** *:***:***********:: *:**:**.:** ** *:: :: :.  .        **

AT2G30340.1     TSSVSCDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPV--SLPSPSMVVSSSS
pp005269_Pp1s15 TTSAS----ALVSGY-------QKQVRERGSTSDTQSSKPSTSEVYTTVQSPSSTVATSE
pp011458_Pp1s9_ TASAT----ALVSGY-------QELVQDRGRASDTRSSKPSTTDVHTTVHSPSSTVATSE
                *:*.:    **.*.           .       .::.: *.*. *  :: *** .*::*.

AT2G30340.1     SSNSSATNSMYNPPPSSTAGYSNSLSSDNNVHYFD
pp005269_Pp1s15 SNDAP---------------YWSSIS---------
pp011458_Pp1s9_ SKDRT---------------YWSPIT---------
                *.: .               * ..::
BoxShade v3.31 C (beta, 970507) Output
AT2G30340.1     - M S R E R E G F G E Y Y E T V K K I K K D P A F E T T T D H A V M G I R R H V A V P P G T T L N T - - - - V T P C A A
pp005269_Pp1s15    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M L S S Q G Q G S T P C A A
pp011458_Pp1s9_    M L V H S R A Q H G E - - - - - R K V K S - P T T E S - - - - - - - - - R K - - - - - - - K M L N S Q G Q G S T P C A A
 
AT2G30340.1     C K L L R R R C A E E C P F S P Y F S P H E P H K F A A V H K V F G A S N V S K M L L E V G E S Q R G D A A N S L V Y E
pp005269_Pp1s15    C K L L R R R C A Q E C P F S P Y F S P H E P Q K F A C V H K I F G A S N V S K M L M E V P E N Q R A D A A S S L V Y E
pp011458_Pp1s9_    C K L L R R R C A Q E C P F S P Y F S P Q E P Q K F A C V H K I F G A S N V S K M L M E V P E N Q R A D A A S S L V Y E
 
AT2G30340.1     A N L R L R D P I Y G C M G A I S A L Q H H I Q S L Q S E L T T V R T E I L R H K Y Q E A T T I T S L Q N N F N S T T T
pp005269_Pp1s15    A N A R I R D P V Y G C M G A I S A L Q Q Q A Q A L Q A E L S A V R Q E I T R Y R Q H D S S P T D S A - - - - - P A T T
pp011458_Pp1s9_    A N A R I R D P V Y G C M G A I S A L Q Q Q A Q A L Q A E L N A V R M E I N R Y R Q H E N S P T N G T - - - - - - L T T
 
AT2G30340.1     T S S V S C D Q H A L A S A I L L P P P P P P P P T P R P P R L L S S Q P A P P P T P P V - - S L P S P S M V V S S S S
pp005269_Pp1s15    T T S A S - - - - A L V S G Y - - - - - - - Q K Q V R E R G S T S D T Q S S K P S T S E V Y T T V Q S P S S T V A T S E
pp011458_Pp1s9_    T A S A T - - - - A L V S G Y - - - - - - - Q E L V Q D R G R A S D T R S S K P S T T D V H T T V H S P S S T V A T S E
 
AT2G30340.1     S S N S S A T N S M Y N P P P S S T A G Y S N S L S S D N N V H Y F D
pp005269_Pp1s15    S N D A P - - - - - - - - - - - - - - - Y W S S I S - - - - - - - - -
pp011458_Pp1s9_    S K D R T - - - - - - - - - - - - - - - Y W S P I T - - - - - - - - -
 
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