fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt015373 not found in 218aa AT2G40470.1 1st_not 0.581333333 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G30340.1     MSREREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLLR
pt015373_POPTR_ MSRERKRFDELGKKIKR-ESDATYQ-------MG-RRHMLGPPG-TLNTITPCAACKLLR
                *****: *.*  :.:*: :.*.:::       ** ***:  *** ****:**********

AT2G30340.1     RRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRL
pt015373_POPTR_ RRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPQNQRADAANSLVYEANVRL
                ****:*************:***:**************:** :.**.***********:**

AT2G30340.1     RDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSVS
pt015373_POPTR_ RDPVYGCMGAISALQQQVQSLEAELNAVRNEILKYRYREANIIHS-----------SHV-
                ***:***********:::***::**.:**.***:::*:**. * *           * * 

AT2G30340.1     CDQHALAS--AILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNSS
pt015373_POPTR_ ----ALLSSGAVSIAAPSPAPSTPPPP-----TASPPP--------------------SS
                    ** *  *: :..*.*.*.** **      .:***                    **

AT2G30340.1     ATNSMYNPPPSSTAGYSNSLSSDNNVHYFD
pt015373_POPTR_ SSSSMYTQPTSSAAA-DYSTTSTENVSFFG
                ::.***. *.**:*. . * :* :** :*.
BoxShade v3.31 C (beta, 970507) Output
AT2G30340.1     M S R E R E G F G E Y Y E T V K K I K K D P A F E T T T D H A V M G I R R H V A V P P G T T L N T V T P C A A C K L L R
pt015373_POPTR_    M S R E R K R F D E L G K K I K R - E S D A T Y Q - - - - - - - M G - R R H M L G P P G - T L N T I T P C A A C K L L R
 
AT2G30340.1     R R C A E E C P F S P Y F S P H E P H K F A A V H K V F G A S N V S K M L L E V G E S Q R G D A A N S L V Y E A N L R L
pt015373_POPTR_    R R C A Q E C P F S P Y F S P H E P Q K F A S V H K V F G A S N V S K M L M E V P Q N Q R A D A A N S L V Y E A N V R L
 
AT2G30340.1     R D P I Y G C M G A I S A L Q H H I Q S L Q S E L T T V R T E I L R H K Y Q E A T T I T S L Q N N F N S T T T T S S V S
pt015373_POPTR_    R D P V Y G C M G A I S A L Q Q Q V Q S L E A E L N A V R N E I L K Y R Y R E A N I I H S - - - - - - - - - - - S H V -
 
AT2G30340.1     C D Q H A L A S - - A I L L P P P P P P P P T P R P P R L L S S Q P A P P P T P P V S L P S P S M V V S S S S S S N S S
pt015373_POPTR_    - - - - A L L S S G A V S I A A P S P A P S T P P P P - - - - - T A S P P P - - - - - - - - - - - - - - - - - - - - S S
 
AT2G30340.1     A T N S M Y N P P P S S T A G Y S N S L S S D N N V H Y F D
pt015373_POPTR_    S S S S M Y T Q P T S S A A A - D Y S T T S T E N V S F F G
 
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