fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt014804 not found in 223aa AT2G40470.1 not_not 0.546666666 III
Pt013248 not found in 227aa AT2G40470.1 not_not 0.544 III
Pt037277 not found in 146aa AT1G31320.1 not_not 0.408 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G30340.1     MSREREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLLR
pt037277_POPTR_ -----------------MKES------------G-RK---------LGALSPCAACKLLR
pt014804_POPTR_ MSRDRE---RSEELGKRIKRE-----SDASSFMG-RRQMLGPPV-ILNTVTPCAACKLLR
pt013248_POPTR_ MSRDRE---RFEEIGKRIKRE-----SDASSLMG-RRQMLGPPG-ILNTVTPCAACKLLR
                                 :*..            * *:         *.:::*********

AT2G30340.1     RRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRL
pt037277_POPTR_ RRCAQDCMFAPYFPADEPQKFASVHKVFGASNVNKMLQELPEHQRSDAVSSMVYEANARV
pt014804_POPTR_ RRCAEECPFSPYFSPHEPQKFAAVHKVYGASNVSKLLMEVPESQRVDTANSLVYEANLRL
pt013248_POPTR_ RRCAEECPFSPYFSPLEPQKFAAVHKVFGASNVSKLLMEVPESQRADAANSLVYEANLRL
                ****::* *:***.. **:***:****:*****.*:* *: * ** *:..*:***** *:

AT2G30340.1     RDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQE---ATTITSLQNNFNSTTTTS
pt037277_POPTR_ RDPVYGCVGAISSLQKQIDSLQTQLAIAQAEVVHMRVRQ------FTSSSNPGVM-----
pt014804_POPTR_ RDPVYGSMGAISALQQQIQSLQAELSAIRAEILNYKYREAAAATNIISSTHPALVSSATV
pt013248_POPTR_ RDPVYGSMGAISALQQQIQLLQAELSATRADILNYKYRE-AAASNIISSTHAALVSSATA
                ***:**.:****:**::*: **::*:  :::::. : ::      : *  :         

AT2G30340.1     SVSCDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNS
pt037277_POPTR_ ------------------------------------------------DMAVDQATMGES
pt014804_POPTR_ SISTPSQTLA------PPPQPPPP------------------------SVVVS-SSSSSS
pt013248_POPTR_ SLSAPSQTLA------PPPPPPPTP--------------------PPLSVVVSLSTSSPS
                                                                .:.*. :: . *

AT2G30340.1     SATNSMYNPPPSSTAGYSNSLSSDNNVHYFD
pt037277_POPTR_ LWSC---------------------------
pt014804_POPTR_ LYT------PPTSTSGYS-TISSENNVPYFD
pt013248_POPTR_ LYT------PPTSTSGYS-TISSDNNVPYFD
                  :
BoxShade v3.31 C (beta, 970507) Output
AT2G30340.1     M S R E R E G F G E Y Y E T V K K I K K D P A F E T T T D H A V M G I R R H V A V P P G T T L N T V T P C A A C K L L R
pt037277_POPTR_    - - - - - - - - - - - - - - - - - M K E S - - - - - - - - - - - - G - R K - - - - - - - - - L G A L S P C A A C K L L R
pt014804_POPTR_    M S R D R E - - - R S E E L G K R I K R E - - - - - S D A S S F M G - R R Q M L G P P V - I L N T V T P C A A C K L L R
pt013248_POPTR_    M S R D R E - - - R F E E I G K R I K R E - - - - - S D A S S L M G - R R Q M L G P P G - I L N T V T P C A A C K L L R
 
AT2G30340.1     R R C A E E C P F S P Y F S P H E P H K F A A V H K V F G A S N V S K M L L E V G E S Q R G D A A N S L V Y E A N L R L
pt037277_POPTR_    R R C A Q D C M F A P Y F P A D E P Q K F A S V H K V F G A S N V N K M L Q E L P E H Q R S D A V S S M V Y E A N A R V
pt014804_POPTR_    R R C A E E C P F S P Y F S P H E P Q K F A A V H K V Y G A S N V S K L L M E V P E S Q R V D T A N S L V Y E A N L R L
pt013248_POPTR_    R R C A E E C P F S P Y F S P L E P Q K F A A V H K V F G A S N V S K L L M E V P E S Q R A D A A N S L V Y E A N L R L
 
AT2G30340.1     R D P I Y G C M G A I S A L Q H H I Q S L Q S E L T T V R T E I L R H K Y Q E - - - A T T I T S L Q N N F N S T T T T S
pt037277_POPTR_    R D P V Y G C V G A I S S L Q K Q I D S L Q T Q L A I A Q A E V V H M R V R Q - - - - - - F T S S S N P G V M - - - - -
pt014804_POPTR_    R D P V Y G S M G A I S A L Q Q Q I Q S L Q A E L S A I R A E I L N Y K Y R E A A A A T N I I S S T H P A L V S S A T V
pt013248_POPTR_    R D P V Y G S M G A I S A L Q Q Q I Q L L Q A E L S A T R A D I L N Y K Y R E - A A A S N I I S S T H A A L V S S A T A
 
AT2G30340.1     S V S C D Q H A L A S A I L L P P P P P P P P T P R P P R L L S S Q P A P P P T P P V S L P S P S M V V S S S S S S N S
pt037277_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - D M A V D Q A T M G E S
pt014804_POPTR_    S I S T P S Q T L A - - - - - - P P P Q P P P P - - - - - - - - - - - - - - - - - - - - - - - - S V V V S - S S S S S S
pt013248_POPTR_    S L S A P S Q T L A - - - - - - P P P P P P P T P - - - - - - - - - - - - - - - - - - - - P P L S V V V S L S T S S P S
 
AT2G30340.1     S A T N S M Y N P P P S S T A G Y S N S L S S D N N V H Y F D
pt037277_POPTR_    L W S C - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt014804_POPTR_    L Y T - - - - - - P P T S T S G Y S - T I S S E N N V P Y F D
pt013248_POPTR_    L Y T - - - - - - P P T S T S G Y S - T I S S D N N V P Y F D
 
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