fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os004495 not found in 251aa AT2G40470.1 1st_not 0.544 II
Os020308 not found in 248aa AT2G30340.1 not_1st 0.536 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G30340.1     ----------MSREREGFGEYYETVKKIKKDPAFETTTD-HAVMGIRRHVAVP-----P-
Os004495_Os01t0 ----------MSTERERLD---EIGKKIKREPDTAGVVV-AAVAGTGTGTATPIEHRVPH
Os020308_Os05t0 MLHLFLILFVISDWQDHQD---QVGRKIKRESSAADAADGRTTMMARRSCSMPAAGAGPG
                          :*  ::  .   :  :***::.    ..   :.       : *     * 

AT2G30340.1     ----GTTLNTVTPCAACKLLRRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLE
Os004495_Os01t0 RLGLGGAVNTVTPCAACKLLRRRCAQECPFAPYFSPHEPHKFAAVHKVFGASNVSKMLLE
Os020308_Os05t0 SA--AAAVNTITPCAACKLLRRRCAQECPFSPYFSPLEPHKFASVHKVFGASNVSKMLLE
                    . ::**:**************:****:***** ******:****************

AT2G30340.1     VGESQRGDAANSLVYEANLRLRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQE
Os004495_Os01t0 VGEAERADAASSLVYEANLRLRDPVYGCMGAISMLQQQVNALEAELEAVRAEIFKRRYRQ
Os020308_Os05t0 VHESQRGDAANSLVYEANLRLRDPVYGCMGAILTLQQQVQALEAELAAVRADIVRHKYRL
                * *::*.***.*************:*******  **:::::*::** :**::*.:::*: 

AT2G30340.1     ATTITSLQNNFNSTTTTSSVSCDQHALASAILLPPPPPPPPTPR----------PPRLLS
Os004495_Os01t0 AGAATGLMD-------------DVQVHITAGFAAPPPPPSMHARDVVSVADAGGQGQELA
Os020308_Os05t0 PSAAAVL-------------------------------PSSHASHLLAAAA---AARQLP
                . : : *                               *.  .             : *.

AT2G30340.1     SQP----APPPTPPVSLPSPSMVVSSSSSSNSSATNSMYNPPPSSTAGYSNSLSSDNNVH
Os004495_Os01t0 GAPVISSASPPVYPAGQPS------------------------TSTTDYS-SLNTSEHAA
Os020308_Os05t0 VAGTMGVVTTATLPASASS-------------SSTTAVYAAA-SSSTDYS-SI-TNENVP
                       ..... *.. .*                        :*::.** *: :.::. 

AT2G30340.1     YFD
Os004495_Os01t0 YFG
Os020308_Os05t0 YFS
                **.
BoxShade v3.31 C (beta, 970507) Output
AT2G30340.1     - - - - - - - - - - M S R E R E G F G E Y Y E T V K K I K K D P A F E T T T D - H A V M G I R R H V A V P - - - - - P -
Os004495_Os01t0    - - - - - - - - - - M S T E R E R L D - - - E I G K K I K R E P D T A G V V V - A A V A G T G T G T A T P I E H R V P H
Os020308_Os05t0    M L H L F L I L F V I S D W Q D H Q D - - - Q V G R K I K R E S S A A D A A D G R T T M M A R R S C S M P A A G A G P G
 
AT2G30340.1     - - - - G T T L N T V T P C A A C K L L R R R C A E E C P F S P Y F S P H E P H K F A A V H K V F G A S N V S K M L L E
Os004495_Os01t0    R L G L G G A V N T V T P C A A C K L L R R R C A Q E C P F A P Y F S P H E P H K F A A V H K V F G A S N V S K M L L E
Os020308_Os05t0    S A - - A A A V N T I T P C A A C K L L R R R C A Q E C P F S P Y F S P L E P H K F A S V H K V F G A S N V S K M L L E
 
AT2G30340.1     V G E S Q R G D A A N S L V Y E A N L R L R D P I Y G C M G A I S A L Q H H I Q S L Q S E L T T V R T E I L R H K Y Q E
Os004495_Os01t0    V G E A E R A D A A S S L V Y E A N L R L R D P V Y G C M G A I S M L Q Q Q V N A L E A E L E A V R A E I F K R R Y R Q
Os020308_Os05t0    V H E S Q R G D A A N S L V Y E A N L R L R D P V Y G C M G A I L T L Q Q Q V Q A L E A E L A A V R A D I V R H K Y R L
 
AT2G30340.1     A T T I T S L Q N N F N S T T T T S S V S C D Q H A L A S A I L L P P P P P P P P T P R - - - - - - - - - - P P R L L S
Os004495_Os01t0    A G A A T G L M D - - - - - - - - - - - - - D V Q V H I T A G F A A P P P P P S M H A R D V V S V A D A G G Q G Q E L A
Os020308_Os05t0    P S A A A V L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P S S H A S H L L A A A A - - - A A R Q L P
 
AT2G30340.1     S Q P - - - - A P P P T P P V S L P S P S M V V S S S S S S N S S A T N S M Y N P P P S S T A G Y S N S L S S D N N V H
Os004495_Os01t0    G A P V I S S A S P P V Y P A G Q P S - - - - - - - - - - - - - - - - - - - - - - - - T S T T D Y S - S L N T S E H A A
Os020308_Os05t0    V A G T M G V V T T A T L P A S A S S - - - - - - - - - - - - - S S T T A V Y A A A - S S S T D Y S - S I - T N E N V P
 
AT2G30340.1     Y F D
Os004495_Os01t0    Y F G
Os020308_Os05t0    Y F S
 
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