fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032270 not found in 331aa AT2G40470.1 1st_not 0.549333333 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G30340.1     -----------MSREREG---------------------------FGEYYETVKKIKKDP
Sb032270_Sorbi1 SSSVRRTLSSGTSTENLGSHLFQSTSIPFLSPQAIFFMSTASASEWPDHDELGKKIKRES
                            * *. *                           : :: *  ****::.

AT2G30340.1     AFETTTDHAVMGIRRHVAVP----------PGTTLNTVTPCAACKLLRRRCAEECPFSPY
Sb032270_Sorbi1 AAERMTAAA----RRSCSSPVGAGAVAGAGPGSALNTITPCAACKLLRRRCAQECPFSPY
                * *  *  *    **  : *          **::***:**************:*******

AT2G30340.1     FSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIYGCMGAIS
Sb032270_Sorbi1 FSPLEPHKFAAVHKVFGASNVSKMLLEVHESQRADTANSLVYEANLRLRDPVYGCMGAIL
                *** ************************ ****.*:***************:******* 

AT2G30340.1     ALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSVSCDQHALASAILL
Sb032270_Sorbi1 TLQQQVQALEAELATVRAEIVRHRCRPAAVLPS--SHASQLLAASAAGRGLHAGSR----
                :**:::*:*::**:***:**:**: : *:.:.*  .: ..  ::*:.. . ** :     

AT2G30340.1     PPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNSSATNSMYNPPPSSTA
Sb032270_Sorbi1 -----PSVGARAATLAAAAAAAAVGPVASSSSSSAVYAAAAASSSTDYSSITN-------
                     *.  .*.. * :: .*..  * .* .*.* * :::::*.*:  .*: *       

AT2G30340.1     GYSNSLSSDNNVHYFD
Sb032270_Sorbi1 ---------ENVPYFG
                         :** **.
BoxShade v3.31 C (beta, 970507) Output
AT2G30340.1     - - - - - - - - - - - M S R E R E G - - - - - - - - - - - - - - - - - - - - - - - - - - - F G E Y Y E T V K K I K K D P
Sb032270_Sorbi1    S S S V R R T L S S G T S T E N L G S H L F Q S T S I P F L S P Q A I F F M S T A S A S E W P D H D E L G K K I K R E S
 
AT2G30340.1     A F E T T T D H A V M G I R R H V A V P - - - - - - - - - - P G T T L N T V T P C A A C K L L R R R C A E E C P F S P Y
Sb032270_Sorbi1    A A E R M T A A A - - - - R R S C S S P V G A G A V A G A G P G S A L N T I T P C A A C K L L R R R C A Q E C P F S P Y
 
AT2G30340.1     F S P H E P H K F A A V H K V F G A S N V S K M L L E V G E S Q R G D A A N S L V Y E A N L R L R D P I Y G C M G A I S
Sb032270_Sorbi1    F S P L E P H K F A A V H K V F G A S N V S K M L L E V H E S Q R A D T A N S L V Y E A N L R L R D P V Y G C M G A I L
 
AT2G30340.1     A L Q H H I Q S L Q S E L T T V R T E I L R H K Y Q E A T T I T S L Q N N F N S T T T T S S V S C D Q H A L A S A I L L
Sb032270_Sorbi1    T L Q Q Q V Q A L E A E L A T V R A E I V R H R C R P A A V L P S - - S H A S Q L L A A S A A G R G L H A G S R - - - -
 
AT2G30340.1     P P P P P P P P T P R P P R L L S S Q P A P P P T P P V S L P S P S M V V S S S S S S N S S A T N S M Y N P P P S S T A
Sb032270_Sorbi1    - - - - - P S V G A R A A T L A A A A A A A A V G P V A S S S S S S A V Y A A A A A S S S T D Y S S I T N - - - - - - -
 
AT2G30340.1     G Y S N S L S S D N N V H Y F D
Sb032270_Sorbi1    - - - - - - - - - E N V P Y F G
 
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