fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032270 not found in 331aa AT2G40470.1 1st_not 0.549333333 II
Sb008940 NHIPHRLGLGLGGVLN in 55/260 AT2G40470.1 not_not 0.533333333 III
Sb000645 not found in 207aa AT1G31320.1 not_not 0.4 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G30340.1     -------MSR--EREGFGEY----------------------------------YETVKK
Sb000645_Sorbi1 -------MRD-----------------------AV-------------------------
Sb032270_Sorbi1 SSSVRRTLSSGTSTENLGSHLFQSTSIPFLSPQAIFFMSTASASEWPDH-----DELGKK
Sb008940_Sorbi1 ---MQQTLSD-------------------------------SSARWTSTSRERVDEIGKK
                       :                                                    

AT2G30340.1     IKKDPAFETTTDHAVMGIRRHVAVP------------PGTTLNTVTPCAACKLLRRRCAE
Sb000645_Sorbi1 -------------VVMAVPGAAAGAGGGKSG--SGGGAGGAASA-APCAACKLLRRRCAA
Sb032270_Sorbi1 IKRESAAERMT----AAARRSCSSPVGAGAV--AGAGPGSALNTITPCAACKLLRRRCAQ
Sb008940_Sorbi1 IKREPDTAALA----VAVASASTVPADNHIPHRLGLGLGGVLNTLTPCAACKLLRRRCAQ
                                .     : .             * . .: :************* 

AT2G30340.1     ECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRLRDPIY
Sb000645_Sorbi1 GCVFAPYFPPGEPHKFANVHKVFGASNVSKLLQEIPVQHRGDAVSSLVYEANARVRDPVY
Sb032270_Sorbi1 ECPFSPYFSPLEPHKFAAVHKVFGASNVSKMLLEVHESQRADTANSLVYEANLRLRDPVY
Sb008940_Sorbi1 ECPFAPYFSPHEPHKFAAVHKVFGASNVSKLLLEVAEGERADAASSLVYEANLRLRDPVY
                 * *:***.* ****** ************:* *:   .*.*:..******* *:***:*

AT2G30340.1     GCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTSSVSCDQHA
Sb000645_Sorbi1 GCVGAISSLQQQVETLQAQLALAQAEMVRLR----------------------MSNDYI-
Sb032270_Sorbi1 GCMGAILTLQQQVQALEAELATVRAEIVRHRCRPAA-----------------VLPSSH-
Sb008940_Sorbi1 GCMGAISMLQQQVNALEAELEAVRAEILKHRYRQAGG------------GNRLIDDDAH-
                **:***  **:::::*:::*  .::*::: :                      :  .   

AT2G30340.1     LASAILLPPPPPP-------PPT-PRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNS
Sb000645_Sorbi1 --------------LH------------RLKAASRANGGGG-----------SSYTGSPS
Sb032270_Sorbi1 -ASQLLAASAAGRGLHAGSRPSVGARAATLAAAAAAAAVGP-----------VASS-SSS
Sb008940_Sorbi1 -ATASFVAPASAP-VHVNDVVSV------VEAGQEVAATGG-----------GASGMSTS
                                             : :.  .                 :   * *

AT2G30340.1     SATNSMYNPPPSSTAGYSN------SLSSDNNVHYFD-
Sb000645_Sorbi1 SMSSPKTAEPEAHCNATPELLDMVVDQPSMDDAHFWSY
Sb032270_Sorbi1 SAVYAAAA--ASSSTDYS-------SIT-NENVPYFG-
Sb008940_Sorbi1 SAVYVAEAEQPASTNHYS-------SRNPSEHPAYFG-
                *          :     .       .    :.  ::.
BoxShade v3.31 C (beta, 970507) Output
AT2G30340.1     - - - - - - - M S R - - E R E G F G E Y - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Y E T V K K
Sb000645_Sorbi1    - - - - - - - M R D - - - - - - - - - - - - - - - - - - - - - - - A V - - - - - - - - - - - - - - - - - - - - - - - - -
Sb032270_Sorbi1    S S S V R R T L S S G T S T E N L G S H L F Q S T S I P F L S P Q A I F F M S T A S A S E W P D H - - - - - D E L G K K
Sb008940_Sorbi1    - - - M Q Q T L S D - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - S S A R W T S T S R E R V D E I G K K
 
AT2G30340.1     I K K D P A F E T T T D H A V M G I R R H V A V P - - - - - - - - - - - - P G T T L N T V T P C A A C K L L R R R C A E
Sb000645_Sorbi1    - - - - - - - - - - - - - V V M A V P G A A A G A G G G K S G - - S G G G A G G A A S A - A P C A A C K L L R R R C A A
Sb032270_Sorbi1    I K R E S A A E R M T - - - - A A A R R S C S S P V G A G A V - - A G A G P G S A L N T I T P C A A C K L L R R R C A Q
Sb008940_Sorbi1    I K R E P D T A A L A - - - - V A V A S A S T V P A D N H I P H R L G L G L G G V L N T L T P C A A C K L L R R R C A Q
 
AT2G30340.1     E C P F S P Y F S P H E P H K F A A V H K V F G A S N V S K M L L E V G E S Q R G D A A N S L V Y E A N L R L R D P I Y
Sb000645_Sorbi1    G C V F A P Y F P P G E P H K F A N V H K V F G A S N V S K L L Q E I P V Q H R G D A V S S L V Y E A N A R V R D P V Y
Sb032270_Sorbi1    E C P F S P Y F S P L E P H K F A A V H K V F G A S N V S K M L L E V H E S Q R A D T A N S L V Y E A N L R L R D P V Y
Sb008940_Sorbi1    E C P F A P Y F S P H E P H K F A A V H K V F G A S N V S K L L L E V A E G E R A D A A S S L V Y E A N L R L R D P V Y
 
AT2G30340.1     G C M G A I S A L Q H H I Q S L Q S E L T T V R T E I L R H K Y Q E A T T I T S L Q N N F N S T T T T S S V S C D Q H A
Sb000645_Sorbi1    G C V G A I S S L Q Q Q V E T L Q A Q L A L A Q A E M V R L R - - - - - - - - - - - - - - - - - - - - - - M S N D Y I -
Sb032270_Sorbi1    G C M G A I L T L Q Q Q V Q A L E A E L A T V R A E I V R H R C R P A A - - - - - - - - - - - - - - - - - V L P S S H -
Sb008940_Sorbi1    G C M G A I S M L Q Q Q V N A L E A E L E A V R A E I L K H R Y R Q A G G - - - - - - - - - - - - G N R L I D D D A H -
 
AT2G30340.1     L A S A I L L P P P P P P - - - - - - - P P T - P R P P R L L S S Q P A P P P T P P V S L P S P S M V V S S S S S S N S
Sb000645_Sorbi1    - - - - - - - - - - - - - - L H - - - - - - - - - - - - R L K A A S R A N G G G G - - - - - - - - - - - S S Y T G S P S
Sb032270_Sorbi1    - A S Q L L A A S A A G R G L H A G S R P S V G A R A A T L A A A A A A A A V G P - - - - - - - - - - - V A S S - S S S
Sb008940_Sorbi1    - A T A S F V A P A S A P - V H V N D V V S V - - - - - - V E A G Q E V A A T G G - - - - - - - - - - - G A S G M S T S
 
AT2G30340.1     S A T N S M Y N P P P S S T A G Y S N - - - - - - S L S S D N N V H Y F D -
Sb000645_Sorbi1    S M S S P K T A E P E A H C N A T P E L L D M V V D Q P S M D D A H F W S Y
Sb032270_Sorbi1    S A V Y A A A A - - A S S S T D Y S - - - - - - - S I T - N E N V P Y F G -
Sb008940_Sorbi1    S A V Y V A E A E Q P A S T N H Y S - - - - - - - S R N P S E H P A Y F G -
 
0