fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm040422 not found in 223aa AT2G40470.1 1st_not 0.576 II
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G30340.1     MSREREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVP-PGTTLNTVTPCAACKLL
gm040422_Glyma1 --------------------------------MG-RKHFYGPTPGTTLNTVTPCAACKLL
                                                ** *:*.  * *****************

AT2G30340.1     RRRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLR
gm040422_Glyma1 RRRCAEECPFSPYFSPHEPQKFAAVHKVFGASNVSKMLMEVPEGQRADAANSLVYEANLR
                *******************:******************:** *.**.*************

AT2G30340.1     LRDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQN----NFNSTTT
gm040422_Glyma1 LRDPVYGCMGAISALQQQVQTLQAELNAIRAEILKYKYREAASIISSQHVALVSSADAIS
                ****:***********:::*:**:**.::*:***::**:**::* * *:    .  .: :

AT2G30340.1     TSSVSCD-QHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSS
gm040422_Glyma1 IAAIPADSSQGLSQPHAHPHPPPPKPL----------PSPLPKP---LPSPSIILSSLSS
                 :::..* .:.*:..   * **** *           *:* *.*   *****:::** **

AT2G30340.1     SNSSATNSMYNPPPSSTAGYSNSLSSDNNVHYFD
gm040422_Glyma1 SSAS---SVYTPPKSTMS--LGSISTTANVPYFV
                *.:*   *:*.** *: :   .*:*:  ** **
BoxShade v3.31 C (beta, 970507) Output
AT2G30340.1     M S R E R E G F G E Y Y E T V K K I K K D P A F E T T T D H A V M G I R R H V A V P - P G T T L N T V T P C A A C K L L
gm040422_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G - R K H F Y G P T P G T T L N T V T P C A A C K L L
 
AT2G30340.1     R R R C A E E C P F S P Y F S P H E P H K F A A V H K V F G A S N V S K M L L E V G E S Q R G D A A N S L V Y E A N L R
gm040422_Glyma1    R R R C A E E C P F S P Y F S P H E P Q K F A A V H K V F G A S N V S K M L M E V P E G Q R A D A A N S L V Y E A N L R
 
AT2G30340.1     L R D P I Y G C M G A I S A L Q H H I Q S L Q S E L T T V R T E I L R H K Y Q E A T T I T S L Q N - - - - N F N S T T T
gm040422_Glyma1    L R D P V Y G C M G A I S A L Q Q Q V Q T L Q A E L N A I R A E I L K Y K Y R E A A S I I S S Q H V A L V S S A D A I S
 
AT2G30340.1     T S S V S C D - Q H A L A S A I L L P P P P P P P P T P R P P R L L S S Q P A P P P T P P V S L P S P S M V V S S S S S
gm040422_Glyma1    I A A I P A D S S Q G L S Q P H A H P H P P P P K P L - - - - - - - - - - P S P L P K P - - - L P S P S I I L S S L S S
 
AT2G30340.1     S N S S A T N S M Y N P P P S S T A G Y S N S L S S D N N V H Y F D
gm040422_Glyma1    S S A S - - - S V Y T P P K S T M S - - L G S I S T T A N V P Y F V
 
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