fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30340.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm015213 not found in 198aa AT2G40470.1 not_not 0.557333333 III
Gm010535 not found in 191aa AT2G40470.1 not_not 0.557333333 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G30340.1     MSREREGFGEYYETVKKIKKDPAFETTTDHAVMGIRRHVAVPPGTTLNTVTPCAACKLLR
gm015213_Glyma0 --------------------------------MG-RRHMLGPPG-TLNTITPCAACKLLR
gm010535_Glyma0 --------------------------------MG-RRHMLGPPG-TLNTITPCAACKLLR
                                                ** ***:  *** ****:**********

AT2G30340.1     RRCAEECPFSPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGESQRGDAANSLVYEANLRL
gm015213_Glyma0 RRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRL
gm010535_Glyma0 RRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPECQRADAANSLVYEANVRL
                ****:*************:***:**************:** *.**.***********:**

AT2G30340.1     RDPIYGCMGAISALQHHIQSLQSELTTVRTEILRHKYQEATTITSLQNNFNSTTTTS-SV
gm015213_Glyma0 RDPVYGCMGAISALQQQVQSLQAELNAVRGEILKYKLREANMIPS-----------SHHV
gm010535_Glyma0 RDPVYGCMGAISALQQQVQSLQAELNAVRGEILKYKLREANMIPS-----------S-HV
                ***:***********:::****:**.:** ***::* :**. *.*           *  *

AT2G30340.1     SCDQHALASAILLPPPPPPPPTPRPPRLLSSQPAPPPTPPVSLPSPSMVVSSSSSSNSSA
gm015213_Glyma0 GMLPSSGAVSIAAPPPPPPPPPP-PP------------PPPSLPLPL----------TSP
gm010535_Glyma0 AMLPSSGAVSIAAPPPPPPPPPPLPP------------PSLPLPLPL----------TSS
                .    : * :*  ********.* **            *. .** *           :*.

AT2G30340.1     TNSMY---NPPPSSTAGYSNSLSSDNNVHYFD
gm015213_Glyma0 SSSIYIQHRDPTTYT-----TISSD-NISYFG
gm010535_Glyma0 PPSMYIQQRDPTTYT-----TIST--------
                . *:*   . *.: *     ::*:
BoxShade v3.31 C (beta, 970507) Output
AT2G30340.1     M S R E R E G F G E Y Y E T V K K I K K D P A F E T T T D H A V M G I R R H V A V P P G T T L N T V T P C A A C K L L R
gm015213_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G - R R H M L G P P G - T L N T I T P C A A C K L L R
gm010535_Glyma0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M G - R R H M L G P P G - T L N T I T P C A A C K L L R
 
AT2G30340.1     R R C A E E C P F S P Y F S P H E P H K F A A V H K V F G A S N V S K M L L E V G E S Q R G D A A N S L V Y E A N L R L
gm015213_Glyma0    R R C A Q E C P F S P Y F S P H E P Q K F A S V H K V F G A S N V S K M L M E V P E C Q R A D A A N S L V Y E A N V R L
gm010535_Glyma0    R R C A Q E C P F S P Y F S P H E P Q K F A S V H K V F G A S N V S K M L M E V P E C Q R A D A A N S L V Y E A N V R L
 
AT2G30340.1     R D P I Y G C M G A I S A L Q H H I Q S L Q S E L T T V R T E I L R H K Y Q E A T T I T S L Q N N F N S T T T T S - S V
gm015213_Glyma0    R D P V Y G C M G A I S A L Q Q Q V Q S L Q A E L N A V R G E I L K Y K L R E A N M I P S - - - - - - - - - - - S H H V
gm010535_Glyma0    R D P V Y G C M G A I S A L Q Q Q V Q S L Q A E L N A V R G E I L K Y K L R E A N M I P S - - - - - - - - - - - S - H V
 
AT2G30340.1     S C D Q H A L A S A I L L P P P P P P P P T P R P P R L L S S Q P A P P P T P P V S L P S P S M V V S S S S S S N S S A
gm015213_Glyma0    G M L P S S G A V S I A A P P P P P P P P P P - P P - - - - - - - - - - - - P P P S L P L P L - - - - - - - - - - T S P
gm010535_Glyma0    A M L P S S G A V S I A A P P P P P P P P P P L P P - - - - - - - - - - - - P S L P L P L P L - - - - - - - - - - T S S
 
AT2G30340.1     T N S M Y - - - N P P P S S T A G Y S N S L S S D N N V H Y F D
gm015213_Glyma0    S S S I Y I Q H R D P T T Y T - - - - - T I S S D - N I S Y F G
gm010535_Glyma0    P P S M Y I Q Q R D P T T Y T - - - - - T I S T - - - - - - - -
 
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