fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30395.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb006955 not found in 222aa AT2G30395.1 1st_1st 0.216957605 Ib
Gm004894 not found in 185aa AT2G30395.1 1st_1st 0.324189526 Ib
Pt013151 PCKKLLLLFRFKLKR in 39/193 AT2G30395.1 1st_1st 0.294264339 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G30395.1     -------------MRVKATLINF----KSKLSKSCNRFVSLFRFRVKRPVFIRPLRAR-H
pt013151_POPTR_ MGFELEFSPKRAPVTTVALDLSFINHGGSKLFSPCKKLLLLFRFKLKRPVFIRGLQLR-R
Sb006955_Sorbi1 ------------------MPLCCVE------CKPCNGHGAFFKSRRPAQQLRRALGKMLV
gm004894_Glyma0 -------------MKGKALGVF-----KSKLLKPCKKLLLFFRLKPKKYLFIRALKFRAH
                                    :           ..*:    :*: :     : * *     

AT2G30395.1     GNVKPRHQHHHSKKPICSCLC---FLNSSKNHKMSNAK------------------HRSS
pt013151_POPTR_ RSKKPR--KAPQKNRVFNSLL-SVFHPLRKSRKM--------------------------
Sb006955_Sorbi1 SGTRRR----PRRPGSFSSVR-AVFWPLMSMRSEADARPPTDFSPDVTVSSSGARAPRST
gm004894_Glyma0 KSTFPK--AFPRKPTIMSSLLQSVFRSPKKSKHA--------------------------
                 .   :      :    ..:    *    . :                            

AT2G30395.1     SFSVNDDDYSKFMQSPLTPATAKKLFTSP-----ITTPYSSR--TRKSLNARDTFEDNAV
pt013151_POPTR_ -------DRVSELRSVSEPECERMLFPSP-----LTPAYIKA----SLEKKRQTFGDEDV
Sb006955_Sorbi1 TA-----DRVLALQARLGGEGEATRAPPPQPQLQLTAAVAAGDEAKAIVVSHGC---GDV
gm004894_Glyma0 -------DTLQGLKSPSNVH-ETPFFPSP-----LTPACVMAHGAEKMEASRQ-----EV
                       *    :::           ..*     :*..             :       *

AT2G30395.1     EDACRSFENYLIHLIVEEGKIDDLMDIEELLFCWKNLKSPVFIELVSRFYGELCRDLFSG
pt013151_POPTR_ EDACRSFENYLVEMMVEEGQVRDLMD------------CPVFIDLVGRFYGELCKDLFSP
Sb006955_Sorbi1 EAACRSFERHLVEMLVEERKVMDLTDVEELLCCWEQLRCPAFVRLVGRFYGELCMDLFSS
gm004894_Glyma0 EDACRSFENYLVEMIVEEGKTRDLMDVEELLYCWKNLRCPVFIDLVSRFYGELCKDLFSP
                * ******.:*:.::*** :  ** *            .*.*: **.******* **** 

AT2G30395.1     E------------------
pt013151_POPTR_ DDDNTDINSPK--------
Sb006955_Sorbi1 AQDADDVWSSQSDSEDLSV
gm004894_Glyma0 DSEEGD--SSK--------
BoxShade v3.31 C (beta, 970507) Output
AT2G30395.1     - - - - - - - - - - - - - M R V K A T L I N F - - - - K S K L S K S C N R F V S L F R F R V K R P V F I R P L R A R - H
pt013151_POPTR_    M G F E L E F S P K R A P V T T V A L D L S F I N H G G S K L F S P C K K L L L L F R F K L K R P V F I R G L Q L R - R
Sb006955_Sorbi1    - - - - - - - - - - - - - - - - - - M P L C C V E - - - - - - C K P C N G H G A F F K S R R P A Q Q L R R A L G K M L V
gm004894_Glyma0    - - - - - - - - - - - - - M K G K A L G V F - - - - - K S K L L K P C K K L L L F F R L K P K K Y L F I R A L K F R A H
 
AT2G30395.1     G N V K P R H Q H H H S K K P I C S C L C - - - F L N S S K N H K M S N A K - - - - - - - - - - - - - - - - - - H R S S
pt013151_POPTR_    R S K K P R - - K A P Q K N R V F N S L L - S V F H P L R K S R K M - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb006955_Sorbi1    S G T R R R - - - - P R R P G S F S S V R - A V F W P L M S M R S E A D A R P P T D F S P D V T V S S S G A R A P R S T
gm004894_Glyma0    K S T F P K - - A F P R K P T I M S S L L Q S V F R S P K K S K H A - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G30395.1     S F S V N D D D Y S K F M Q S P L T P A T A K K L F T S P - - - - - I T T P Y S S R - - T R K S L N A R D T F E D N A V
pt013151_POPTR_    - - - - - - - D R V S E L R S V S E P E C E R M L F P S P - - - - - L T P A Y I K A - - - - S L E K K R Q T F G D E D V
Sb006955_Sorbi1    T A - - - - - D R V L A L Q A R L G G E G E A T R A P P P Q P Q L Q L T A A V A A G D E A K A I V V S H G C - - - G D V
gm004894_Glyma0    - - - - - - - D T L Q G L K S P S N V H - E T P F F P S P - - - - - L T P A C V M A H G A E K M E A S R Q - - - - - E V
 
AT2G30395.1     E D A C R S F E N Y L I H L I V E E G K I D D L M D I E E L L F C W K N L K S P V F I E L V S R F Y G E L C R D L F S G
pt013151_POPTR_    E D A C R S F E N Y L V E M M V E E G Q V R D L M D - - - - - - - - - - - - C P V F I D L V G R F Y G E L C K D L F S P
Sb006955_Sorbi1    E A A C R S F E R H L V E M L V E E R K V M D L T D V E E L L C C W E Q L R C P A F V R L V G R F Y G E L C M D L F S S
gm004894_Glyma0    E D A C R S F E N Y L V E M I V E E G K T R D L M D V E E L L Y C W K N L R C P V F I D L V S R F Y G E L C K D L F S P
 
AT2G30395.1     E - - - - - - - - - - - - - - - - - -
pt013151_POPTR_    D D D N T D I N S P K - - - - - - - -
Sb006955_Sorbi1    A Q D A D D V W S S Q S D S E D L S V
gm004894_Glyma0    D S E E G D - - S S K - - - - - - - -
 
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