fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G30395.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt013151 PCKKLLLLFRFKLKR in 39/193 AT2G30395.1 1st_1st 0.294264339 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G30395.1     ---------MRVKATLINFK--------SKLSKSCNRFVSLFRFRVKRPVFIRPLRARHG
pt013151_POPTR_ MGFELEFSPKRAPVTTVALDLSFINHGGSKLFSPCKKLLLLFRFKLKRPVFIRGLQLRRR
                          *. .* : :.        *** ..*:::: ****::******* *: *: 

AT2G30395.1     NVKPRHQHHHSKKPICSCLCFLNS--------SKNHKMSNAKHRSSSFSVNDDDYSKFMQ
pt013151_POPTR_ SKKPRKAPQKNR--------VFNSLLSVFHPLRKSRKM---------------DRVSELR
                . ***:  ::.:        .:**         *.:**               *  . ::

AT2G30395.1     SPLTPATAKKLFTSPITTPY--SSRTRKSLNARDTFEDNAVEDACRSFENYLIHLIVEEG
pt013151_POPTR_ SVSEPECERMLFPSPLTPAYIKASLEKK----RQTFGDEDVEDACRSFENYLVEMMVEEG
                *   *   : **.**:*..*  :*  :*    *:** *: ************:.::****

AT2G30395.1     KIDDLMDIEELLFCWKNLKSPVFIELVSRFYGELCRDLFSGE----------
pt013151_POPTR_ QVRDLMD------C------PVFIDLVGRFYGELCKDLFSPDDDNTDINSPK
                :: ****      *      ****:**.*******:**** :
BoxShade v3.31 C (beta, 970507) Output
AT2G30395.1     - - - - - - - - - M R V K A T L I N F K - - - - - - - - S K L S K S C N R F V S L F R F R V K R P V F I R P L R A R H G
pt013151_POPTR_    M G F E L E F S P K R A P V T T V A L D L S F I N H G G S K L F S P C K K L L L L F R F K L K R P V F I R G L Q L R R R
 
AT2G30395.1     N V K P R H Q H H H S K K P I C S C L C F L N S - - - - - - - - S K N H K M S N A K H R S S S F S V N D D D Y S K F M Q
pt013151_POPTR_    S K K P R K A P Q K N R - - - - - - - - V F N S L L S V F H P L R K S R K M - - - - - - - - - - - - - - - D R V S E L R
 
AT2G30395.1     S P L T P A T A K K L F T S P I T T P Y - - S S R T R K S L N A R D T F E D N A V E D A C R S F E N Y L I H L I V E E G
pt013151_POPTR_    S V S E P E C E R M L F P S P L T P A Y I K A S L E K K - - - - R Q T F G D E D V E D A C R S F E N Y L V E M M V E E G
 
AT2G30395.1     K I D D L M D I E E L L F C W K N L K S P V F I E L V S R F Y G E L C R D L F S G E - - - - - - - - - -
pt013151_POPTR_    Q V R D L M D - - - - - - C - - - - - - P V F I D L V G R F Y G E L C K D L F S P D D D N T D I N S P K
 
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